CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_YERPP (ATP-dependent Clp protease ATP-binding subunit clpX OS=Yersinia pestis (strain Pestoides F) GN=clpX PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 54/97 (55.67%), Postives = 76/97 (78.35%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI +GLIPEF+GR P++ +L+ L+ED L+++L EPKNAL KQY+ LFS+ V+L F ++AL IAKKA A+ TGARGLR+I+E L + MY++P + Sbjct: 294 DLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDLPSM 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_YERPN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=clpX PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 54/97 (55.67%), Postives = 76/97 (78.35%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI +GLIPEF+GR P++ +L+ L+ED L+++L EPKNAL KQY+ LFS+ V+L F ++AL IAKKA A+ TGARGLR+I+E L + MY++P + Sbjct: 294 DLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDLPSM 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_YERPG (ATP-dependent Clp protease ATP-binding subunit clpX OS=Yersinia pestis bv. Antiqua (strain Angola) GN=clpX PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 54/97 (55.67%), Postives = 76/97 (78.35%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI +GLIPEF+GR P++ +L+ L+ED L+++L EPKNAL KQY+ LFS+ V+L F ++AL IAKKA A+ TGARGLR+I+E L + MY++P + Sbjct: 294 DLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDLPSM 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_YERPE (ATP-dependent Clp protease ATP-binding subunit clpX OS=Yersinia pestis GN=clpX PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 54/97 (55.67%), Postives = 76/97 (78.35%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI +GLIPEF+GR P++ +L+ L+ED L+++L EPKNAL KQY+ LFS+ V+L F ++AL IAKKA A+ TGARGLR+I+E L + MY++P + Sbjct: 294 DLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDLPSM 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_YERPB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=clpX PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 54/97 (55.67%), Postives = 76/97 (78.35%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI +GLIPEF+GR P++ +L+ L+ED L+++L EPKNAL KQY+ LFS+ V+L F ++AL IAKKA A+ TGARGLR+I+E L + MY++P + Sbjct: 294 DLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDLPSM 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_YERPA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=clpX PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 54/97 (55.67%), Postives = 76/97 (78.35%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI +GLIPEF+GR P++ +L+ L+ED L+++L EPKNAL KQY+ LFS+ V+L F ++AL IAKKA A+ TGARGLR+I+E L + MY++P + Sbjct: 294 DLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDLPSM 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_YERP3 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=clpX PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 54/97 (55.67%), Postives = 76/97 (78.35%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI +GLIPEF+GR P++ +L+ L+ED L+++L EPKNAL KQY+ LFS+ V+L F ++AL IAKKA A+ TGARGLR+I+E L + MY++P + Sbjct: 294 DLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDLPSM 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_XYLFT (ATP-dependent Clp protease ATP-binding subunit clpX OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=clpX PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 55/95 (57.89%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEFVGR P++ +L L E LVK+LTEPKNA+ KQ+K+LF M NV+L F + AL +A+KA + TGARGLR I+E +L + MYE+P Sbjct: 296 DLIKFGLIPEFVGRLPVVATLDELDESALVKILTEPKNAITKQFKKLFEMENVELEFRQDALSAVARKALKRKTGARGLRTIVELVLLDTMYELP 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_XYLFM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Xylella fastidiosa (strain M12) GN=clpX PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 55/95 (57.89%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEFVGR P++ +L L E LVK+LTEPKNA+ KQ+K+LF M NV+L F + AL +A+KA + TGARGLR I+E +L + MYE+P Sbjct: 296 DLIKFGLIPEFVGRLPVVATLDELDESALVKILTEPKNAITKQFKKLFEMENVELEFRQDALSAVARKALKRKTGARGLRTIVELVLLDTMYELP 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_XYLFA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Xylella fastidiosa GN=clpX PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 55/95 (57.89%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEFVGR P++ +L L E LVK+LTEPKNA+ KQ+K+LF M NV+L F + AL +A+KA + TGARGLR I+E +L + MYE+P Sbjct: 296 DLIKFGLIPEFVGRLPVVATLDELDESALVKILTEPKNAITKQFKKLFEMENVELEFRQDALSAVARKALKRKTGARGLRTIVELVLLDTMYELP 390 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |