CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_PSYIN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Psychromonas ingrahamii (strain 37) GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 55/98 (56.12%), Postives = 73/98 (74.49%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI YGLIPEF+GR P++ +LT L E LV++LT PKNA+ KQY LF + NV+L F E AL +A+KA + TGARGLR+I+E +L + MY++P VK Sbjct: 294 DLIKYGLIPEFIGRLPVVATLTELDEHALVEILTAPKNAITKQYAALFGLENVELEFRENALIAMAQKAMGRKTGARGLRSIVEEVLLDTMYDLPSVK 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_PASMU (ATP-dependent Clp protease ATP-binding subunit clpX OS=Pasteurella multocida GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 55/98 (56.12%), Postives = 77/98 (78.57%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEF+GR P++ L L E+ LVK+LTEPKNAL KQY+ LFS+ +V L F+ +AL +AKKA A+ TGARGLR+I+E+IL + MY++P ++ Sbjct: 290 DLMKFGLIPEFIGRLPVVAPLAELDEEALVKILTEPKNALIKQYQALFSLEDVALEFSPEALTAMAKKALARKTGARGLRSIVEAILLDTMYDLPSLQ 387
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_NATTJ (ATP-dependent Clp protease ATP-binding subunit clpX OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 56/97 (57.73%), Postives = 75/97 (77.32%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DL+ +GLIPEFVGR P++ SL AL ED LV++L EPKNAL KQY++LF ++ V+L E ALR IA++A +NTGARGLRAI+E L + MY++P + Sbjct: 290 DLLKFGLIPEFVGRIPVISSLDALDEDALVRILVEPKNALVKQYQKLFEIDGVELEMQEDALRAIAREAIERNTGARGLRAIVEEHLNDIMYDLPSM 386
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_MYCUA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Mycobacterium ulcerans (strain Agy99) GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 56/95 (58.95%), Postives = 73/95 (76.84%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEF+GR P++ S+T L ++ LVK+L+EPKNAL KQY RLF M+ V+L FT+ AL IA +A + TGARGLRAI+E +L MY+IP Sbjct: 294 DLIKFGLIPEFIGRLPVVASVTNLDKESLVKILSEPKNALVKQYTRLFEMDGVELEFTDDALEAIADQAIHRGTGARGLRAIMEEVLLPVMYDIP 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_MYCS2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Mycobacterium smegmatis GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 57/95 (60.00%), Postives = 73/95 (76.84%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEF+GR P++ S+T L + LVK+L+EPKNAL KQY RLF M+ V+L FTE+AL IA +A + TGARGLRAI+E +L MY+IP Sbjct: 294 DLIKFGLIPEFIGRLPVVASVTNLDKASLVKILSEPKNALVKQYVRLFEMDGVELEFTEEALEAIADQAIHRGTGARGLRAIMEEVLLPVMYDIP 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_MYCMM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 56/95 (58.95%), Postives = 73/95 (76.84%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEF+GR P++ S+T L ++ LVK+L+EPKNAL KQY RLF M+ V+L FT+ AL IA +A + TGARGLRAI+E +L MY+IP Sbjct: 294 DLIKFGLIPEFIGRLPVVASVTNLDKESLVKILSEPKNALVKQYTRLFEMDGVELEFTDDALEAIADQAIHRGTGARGLRAIMEEVLLPVMYDIP 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_METPB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 56/95 (58.95%), Postives = 75/95 (78.95%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P+L +L L E+ L K+L EPKNAL KQY+RLF M NV+L F ++AL ++A+KA + TGARGLR+ILE+IL + MY++P Sbjct: 291 DLLKFGLIPEFVGRLPVLATLEDLDEEALKKILQEPKNALVKQYQRLFEMENVELTFQDEALGLVARKAIERKTGARGLRSILETILLDTMYDLP 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_METNO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 58/95 (61.05%), Postives = 73/95 (76.84%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P+L +L L E L ++L EPKNAL KQY+RLF M NV L F E+AL ++A+KA + TGARGLR+ILESIL E MY++P Sbjct: 291 DLLKFGLIPEFVGRLPVLATLEDLDEIALKRILQEPKNALVKQYQRLFEMENVDLTFQEEALTLVARKAIERKTGARGLRSILESILLETMYDLP 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_METFK (ATP-dependent Clp protease ATP-binding subunit clpX OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 58/97 (59.79%), Postives = 71/97 (73.20%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI +GLIPEFVGR P + +L +L ED LV +L EPKNAL KQY +LF M V L F E ALR+IAKKA + TGARGLR+I+E L E MY++P + Sbjct: 292 DLIKFGLIPEFVGRLPAIATLESLDEDALVTILVEPKNALTKQYIKLFKMEGVDLEFREAALRMIAKKALERKTGARGLRSIMEHALLEIMYDLPSI 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_MANSM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Mannheimia succiniciproducens (strain MBEL55E) GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 55/98 (56.12%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI YGLIPEF+GR P++ L+ L E LV++LTEPKNAL KQY+ LF + NV+L FT +AL +AKKA + TGARGLR+I+E L + MY++P ++ Sbjct: 293 DLIKYGLIPEFIGRLPVVAPLSELDEKALVQILTEPKNALTKQYQALFGLENVELEFTPEALNAMAKKALERKTGARGLRSIVEGALLDTMYDLPSLE 390 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |