CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CLOD6 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium difficile (strain 630) GN=clpX PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.774e-27 Identity = 56/95 (58.95%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ YG+IPEF+GR P+L +L L ED L+++L EPKNAL KQYK+L +++V+L F E ALR IAKKA +NTGARGLR+I+ES++ E M+E+P Sbjct: 289 DLLKYGIIPEFIGRIPVLATLELLDEDALMQILQEPKNALVKQYKKLLELDDVELEFEEGALRAIAKKAIERNTGARGLRSIVESVMMETMFEVP 383
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ACIF5 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=clpX PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.774e-27 Identity = 59/97 (60.82%), Postives = 74/97 (76.29%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DL+ YGLIPEFVGR PIL L L E+ L+ +LT+PKNAL KQY++LF++ V L F +ALR IAKKA A+ TGARGLR+ILE IL + MYE+P + Sbjct: 292 DLVRYGLIPEFVGRLPILALLEELDEEALISILTDPKNALVKQYQKLFALEGVTLEFRTEALRAIAKKALARKTGARGLRSILEQILLDTMYELPSM 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ACIF2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=clpX PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.774e-27 Identity = 59/97 (60.82%), Postives = 74/97 (76.29%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DL+ YGLIPEFVGR PIL L L E+ L+ +LT+PKNAL KQY++LF++ V L F +ALR IAKKA A+ TGARGLR+ILE IL + MYE+P + Sbjct: 292 DLVRYGLIPEFVGRLPILALLEELDEEALISILTDPKNALVKQYQKLFALEGVTLEFRTEALRAIAKKALARKTGARGLRSILEQILLDTMYELPSM 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_DESAH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=clpX PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.929e-27 Identity = 58/98 (59.18%), Postives = 75/98 (76.53%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPEF+GR P++ SL+ L E LVK+LTEPKNAL KQY+RLF NVKL FTE+AL +AK+A + +GARGLRAI+E + + MYE+P + Sbjct: 292 DLIKFGLIPEFLGRLPVVTSLSELNEASLVKILTEPKNALLKQYQRLFEFENVKLTFTEEALAAMAKEAVTRRSGARGLRAIMEETMLDIMYELPSTE 389
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CALS8 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=clpX PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.929e-27 Identity = 56/95 (58.95%), Postives = 78/95 (82.11%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +G+IPEF+GR PI+V+L AL ++ L+K+LTEPKNAL KQY++LF+M+ V+L F ++AL IA KA +NTGARGLRAI+E I+ + M+EIP Sbjct: 290 DLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNALVKQYQKLFAMDGVELEFEKEALEAIADKAIERNTGARGLRAIMEEIMLDVMFEIP 384
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_VIBHB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=clpX PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.437e-27 Identity = 57/95 (60.00%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL KQY LF + + +L F E ALR IAKKA + TGARGLR+ILES+L E MYE+P Sbjct: 296 DLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAALFELEDAELEFREDALRAIAKKAMERKTGARGLRSILESVLLETMYELP 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SHESW (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella sp. (strain W3-18-1) GN=clpX PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.437e-27 Identity = 57/97 (58.76%), Postives = 75/97 (77.32%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL KQY LF M V+L F E AL+ IA KA ++ TGARGLR+I+ESIL + MY+IP V Sbjct: 295 DLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSALFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDIPSV 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SHEPC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=clpX PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.437e-27 Identity = 57/97 (58.76%), Postives = 75/97 (77.32%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL KQY LF M V+L F E AL+ IA KA ++ TGARGLR+I+ESIL + MY+IP V Sbjct: 295 DLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSALFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDIPSV 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SHEB9 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella baltica (strain OS195) GN=clpX PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.437e-27 Identity = 57/97 (58.76%), Postives = 75/97 (77.32%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL KQY LF M V+L F E AL+ IA KA ++ TGARGLR+I+ESIL + MY+IP V Sbjct: 295 DLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSALFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDIPSV 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SHEB8 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella baltica (strain OS185) GN=clpX PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.437e-27 Identity = 57/97 (58.76%), Postives = 75/97 (77.32%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL KQY LF M V+L F E AL+ IA KA ++ TGARGLR+I+ESIL + MY+IP V Sbjct: 295 DLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSALFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDIPSV 391 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |