CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_RHOOB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhodococcus opacus (strain B4) GN=clpX PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.705e-25 Identity = 55/95 (57.89%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEF+GR P++ S+T L ++ LV++L+EPKNAL KQY RLF M+ V+L FT AL IA +A + TGARGLRAI+E +L MY+IP Sbjct: 294 DLIKFGLIPEFIGRLPVVASVTNLDKESLVQILSEPKNALVKQYNRLFDMDGVELEFTTDALEAIADQAILRGTGARGLRAIMEEVLLPVMYDIP 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_PECCP (ATP-dependent Clp protease ATP-binding subunit clpX OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=clpX PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.705e-25 Identity = 52/99 (52.53%), Postives = 78/99 (78.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKT 371 DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF++ V+L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++P +++ Sbjct: 294 DLIKFGLIPEFIGRLPVVATLRELSEEALIQILREPKNALTKQYQALFNLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSLES 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_NITOC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=clpX PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.705e-25 Identity = 55/97 (56.70%), Postives = 71/97 (73.20%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI YGLIPEFVGR P++ +L L E L+++L EPKNAL KQ+ RLF M N K+ F E ALR +A KA TGARGLR+ILE++L + MY++P + Sbjct: 295 DLIKYGLIPEFVGRMPVVATLDELDEAALIRILREPKNALTKQFARLFEMENCKVEFREDALRAVATKAMELKTGARGLRSILENVLLDTMYDLPSM 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_MYCA9 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=clpX PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.705e-25 Identity = 55/95 (57.89%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEF+GR PI+ S+T L + L+K+L+EPKNAL KQY RLF M+ V+L F++ AL IA +A + TGARGLRAI+E +L MY+IP Sbjct: 294 DLIKFGLIPEFIGRLPIVASVTNLDRESLIKILSEPKNALVKQYTRLFEMDGVELEFSQDALEAIADQAIHRGTGARGLRAIMEEVLQPVMYDIP 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_MARMM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Maricaulis maris (strain MCS10) GN=clpX PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.705e-25 Identity = 56/98 (57.14%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEFVGR P++ +L L LV++LTEPKNAL KQY+RLF M V L FTE AL+ IA +A A+ TGARGLR+I+E IL E M+++P ++ Sbjct: 293 DLLRFGLIPEFVGRLPVIATLEDLDIGALVQILTEPKNALVKQYQRLFEMEGVGLTFTEDALKAIANRAIARKTGARGLRSIMEGILLETMFDLPSLE 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_GEOSF (ATP-dependent Clp protease ATP-binding subunit clpX OS=Geobacter sp. (strain FRC-32) GN=clpX PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.705e-25 Identity = 55/95 (57.89%), Postives = 74/95 (77.89%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +G IPEFVGR P+L SLT L E+ +V++L EPKNAL KQY++LF M +VKL FT+ +L IA++A + TGARGLR+ILE+ + + MYEIP Sbjct: 291 DLLKFGFIPEFVGRLPVLASLTELDEEAMVQILKEPKNALVKQYQKLFDMEHVKLKFTDGSLVAIAREALKRKTGARGLRSILENAMLDIMYEIP 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_FRASC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Frankia sp. (strain CcI3) GN=clpX PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.705e-25 Identity = 53/98 (54.08%), Postives = 73/98 (74.49%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YG+IPEF+GR P++ S++ L + L+++LTEPKNAL +QYKRLF +++V L FT AL IA +A + TGARGLRAI+E +L MY+IP K Sbjct: 294 DLLKYGMIPEFIGRLPVITSVSNLDREALIRILTEPKNALVRQYKRLFELDSVDLDFTSDALEAIADQAILRGTGARGLRAIMEEVLLSVMYDIPSRK 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_FRAAA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Frankia alni (strain ACN14a) GN=clpX PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.705e-25 Identity = 53/98 (54.08%), Postives = 73/98 (74.49%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YG+IPEF+GR P++ S++ L + L+++LTEPKNAL +QYKRLF +++V L FT AL IA +A + TGARGLRAI+E +L MY+IP K Sbjct: 298 DLLKYGMIPEFIGRLPVITSVSNLDREALIRILTEPKNALVRQYKRLFELDSVDLDFTSDALEAIADQAILRGTGARGLRAIMEEVLLSVMYDIPSRK 395
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_DESDG (ATP-dependent Clp protease ATP-binding subunit clpX OS=Desulfovibrio desulfuricans (strain G20) GN=clpX PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.705e-25 Identity = 50/97 (51.55%), Postives = 74/97 (76.29%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DL+ +GLIPEF+GR P++ + L ED LV++L EPKNAL +QY++LF +++VKL FT ALR +A++A + TGARGLR +LES++ E M+ +P + Sbjct: 290 DLVKFGLIPEFIGRIPVITHVNELAEDDLVRILQEPKNALVRQYQKLFELDHVKLRFTSNALRAVARQAIERKTGARGLRNVLESVMLEIMFNLPSM 386
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CORA7 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=clpX PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.705e-25 Identity = 53/96 (55.21%), Postives = 73/96 (76.04%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPD 362 DL+ +GLIPEF+GR P++ ++ L + LVKVL EPKN+L KQY+RLFSM+ +LHF ++AL IA+ A + TGARGLRAI+E +L MY++PD Sbjct: 304 DLVKFGLIPEFIGRLPVVATVDNLDRESLVKVLVEPKNSLVKQYQRLFSMDGAELHFEDEALEAIAELALERKTGARGLRAIMEELLVPIMYDLPD 399 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |