CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_HALHL (ATP-dependent Clp protease ATP-binding subunit clpX OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=clpX PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.532e-25 Identity = 53/98 (54.08%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEFVGR P++ +L L ++ LV++L EPKNAL KQY++LF M V+L + ALR +A KA + TGARGLR I+E +L E MYE+P ++ Sbjct: 295 DLVRYGLIPEFVGRLPVIATLNELDQEALVQILREPKNALVKQYQKLFEMEGVELDLRDDALRAVADKAMERKTGARGLRTIIEQVLLETMYELPSME 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_FRASN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Frankia sp. (strain EAN1pec) GN=clpX PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.532e-25 Identity = 54/98 (55.10%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YG+IPEF+GR PI+ S++ L + L+++LTEPKNAL +QYKRLF ++ V L FT AL IA +A + TGARGLRAI+E +L MY+IP K Sbjct: 295 DLLKYGMIPEFIGRLPIITSVSNLDREALIRILTEPKNALVRQYKRLFELDGVDLDFTTDALEAIADQAILRGTGARGLRAIMEEVLLSVMYDIPSRK 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_DINSH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Dinoroseobacter shibae (strain DFL 12) GN=clpX PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.532e-25 Identity = 55/95 (57.89%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P++ +LT L ED LV +LT+PKNAL KQY+RLF + + +L FTE AL IA +A + TGARGLR+ILE IL M+++P Sbjct: 289 DLLKFGLIPEFVGRLPVIATLTDLDEDALVTILTQPKNALVKQYQRLFELEDAQLTFTEDALNAIAGRAIERKTGARGLRSILEDILLNTMFDLP 383
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BREBN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=clpX PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.532e-25 Identity = 55/95 (57.89%), Postives = 74/95 (77.89%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P+L +L L E+ LV++LTEPKN+L KQY++L S++ V+L F AL IAK+A +NTGARGLRAI+E I+ + MYE+P Sbjct: 291 DLLKFGLIPEFVGRLPVLATLEPLDEETLVRILTEPKNSLVKQYQKLLSLDGVELEFDNGALLQIAKEAIKRNTGARGLRAIIEQIMLDMMYELP 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_AZOBR (ATP-dependent Clp protease ATP-binding subunit clpX OS=Azospirillum brasilense GN=clpX PE=3 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 3.532e-25 Identity = 53/95 (55.79%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR P++ +L+ L E LV++LT+PKNAL KQY+RLF M +V+L F++ ALR I+ KA + TGARGLR+I+ESIL + M+++P Sbjct: 291 DLLKFGLIPEFIGRLPVVATLSDLDETALVEILTKPKNALVKQYQRLFEMEDVRLEFSDDALRTISHKAIQRKTGARGLRSIMESILLDPMFDLP 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX2_METCA (ATP-dependent Clp protease ATP-binding subunit clpX 2 OS=Methylococcus capsulatus GN=clpX2 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.532e-25 Identity = 57/95 (60.00%), Postives = 70/95 (73.68%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI YGLIPEFVGR P++ +L L E LV++LTEPKNAL KQY+RLF M + +L + AL IA+KA A+ TGARGLR ILE L + MYE+P Sbjct: 297 DLIRYGLIPEFVGRLPVVATLEELDEAALVRILTEPKNALVKQYRRLFEMESCELEIRDDALGAIARKAMARKTGARGLRTILEHTLLDTMYELP 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_THET2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=clpX PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.613e-25 Identity = 54/95 (56.84%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +G+IPEFVGR P++V L L ED LV++LTEPKNAL KQY+ LF M ++L FT+ AL+ +A++A + TGARGLRAILE + + M+E P Sbjct: 275 DLIKFGMIPEFVGRAPLIVQLHPLGEDDLVRILTEPKNALVKQYQELFRMEGIELRFTQAALKEVARRALKRGTGARGLRAILEKAMVDLMFEAP 369
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_PSEPF (ATP-dependent Clp protease ATP-binding subunit clpX OS=Pseudomonas fluorescens (strain Pf0-1) GN=clpX PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.613e-25 Identity = 55/95 (57.89%), Postives = 70/95 (73.68%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M V L F AL+ +AK+A + TGARGLR+ILE +L + MYEIP Sbjct: 295 DLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRSDALKSVAKRALERKTGARGLRSILEGVLLDTMYEIP 389
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_PSEAE (ATP-dependent Clp protease ATP-binding subunit clpX OS=Pseudomonas aeruginosa GN=clpX PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.613e-25 Identity = 55/95 (57.89%), Postives = 70/95 (73.68%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL KQY +LF M V L F AL+ +A+KA + TGARGLR+ILE IL + MYEIP Sbjct: 294 DLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRPDALKAVARKALERKTGARGLRSILEGILLDTMYEIP 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_PSEAB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=clpX PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.613e-25 Identity = 55/95 (57.89%), Postives = 70/95 (73.68%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL KQY +LF M V L F AL+ +A+KA + TGARGLR+ILE IL + MYEIP Sbjct: 294 DLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRPDALKAVARKALERKTGARGLRSILEGILLDTMYEIP 388 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |