CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SHEB5 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=clpX PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.437e-27 Identity = 57/97 (58.76%), Postives = 75/97 (77.32%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL KQY LF M V+L F E AL+ IA KA ++ TGARGLR+I+ESIL + MY+IP V Sbjct: 295 DLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSALFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDIPSV 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SHEB2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella baltica (strain OS223) GN=clpX PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.437e-27 Identity = 57/97 (58.76%), Postives = 75/97 (77.32%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL KQY LF M V+L F E AL+ IA KA ++ TGARGLR+I+ESIL + MY+IP V Sbjct: 295 DLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSALFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDIPSV 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_LACPL (ATP-dependent Clp protease ATP-binding subunit clpX OS=Lactobacillus plantarum GN=clpX PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.437e-27 Identity = 59/101 (58.42%), Postives = 79/101 (78.22%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP---DVK 368 DL+ +GLIPEF+GR PIL +L LTED LV++LTEPKNAL KQY+RL +++ +L F + ALR IA++A A+NTGARGLR+I+E + + MY+IP DVK Sbjct: 296 DLLQFGLIPEFIGRLPILTALERLTEDDLVRILTEPKNALVKQYQRLIALDGAELDFNDDALRAIAQEALARNTGARGLRSIIEDTMRDIMYDIPSREDVK 396
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BRASB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=clpX PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.437e-27 Identity = 57/98 (58.16%), Postives = 77/98 (78.57%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEFVGR P++ +L L E+ L K+LTEPKNAL KQY+RLF M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++P ++ Sbjct: 291 DLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLPGLE 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_AGRVS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=clpX PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.437e-27 Identity = 56/98 (57.14%), Postives = 78/98 (79.59%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M +V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+P+++ Sbjct: 294 DLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELSFHEDALREIARKAITRKTGARGLRSIMEKILLDTMFELPELE 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ACIAD (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter sp. (strain ADP1) GN=clpX PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.437e-27 Identity = 57/98 (58.16%), Postives = 75/98 (76.53%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEF+GR P++ +L L E L+++LTEPKNAL +QY+ LF M NV L F E ALR IAKKA +NTGARGLR+I+E++L E MY++P K Sbjct: 293 DLVKFGLIPEFIGRLPVIATLEELDEAALMQILTEPKNALTRQYQSLFQMENVDLVFEESALRAIAKKALERNTGARGLRSIMENVLLETMYDLPSRK 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SHESR (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella sp. (strain MR-7) GN=clpX PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.407e-27 Identity = 56/98 (57.14%), Postives = 75/98 (76.53%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEF+GR P++ +LT L E+ LV++L+EPKNAL KQY LF M V+L F E AL+ IA KA ++ TGARGLR+I+E IL + MY+IP ++ Sbjct: 295 DLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYNALFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVEGILLDTMYDIPSIE 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SHESM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella sp. (strain MR-4) GN=clpX PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.407e-27 Identity = 56/98 (57.14%), Postives = 75/98 (76.53%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEF+GR P++ +LT L E+ LV++L+EPKNAL KQY LF M V+L F E AL+ IA KA ++ TGARGLR+I+E IL + MY+IP ++ Sbjct: 295 DLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYNALFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVEGILLDTMYDIPSIE 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SHESA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella sp. (strain ANA-3) GN=clpX PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.407e-27 Identity = 56/98 (57.14%), Postives = 75/98 (76.53%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEF+GR P++ +LT L E+ LV++L+EPKNAL KQY LF M V+L F E AL+ IA KA ++ TGARGLR+I+E IL + MY+IP ++ Sbjct: 295 DLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYNALFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVEGILLDTMYDIPSIE 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_MOOTA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Moorella thermoacetica (strain ATCC 39073) GN=clpX PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.407e-27 Identity = 59/95 (62.11%), Postives = 74/95 (77.89%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ YGLIPEFVGR P++V+L AL E L++VLTEP+NAL KQY++LF M+ V L F E AL IA++A + TGARGLRAILE I+ + MYEIP Sbjct: 289 DLLKYGLIPEFVGRLPVIVTLDALDETALIRVLTEPRNALVKQYQKLFEMDGVTLEFKEDALVTIAREAIKRETGARGLRAILEEIMLDVMYEIP 383 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |