CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ORITI (ATP-dependent Clp protease ATP-binding subunit clpX OS=Orientia tsutsugamushi (strain Ikeda) GN=clpX PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.101e-24 Identity = 53/98 (54.08%), Postives = 75/98 (76.53%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL +GLIPEF+GR P++ +L+ L + LV +LT+PKNAL KQY++LF ++ +L F E+AL IA+KA AK TGARGLRAILE +L + M+E+ ++K Sbjct: 286 DLTKFGLIPEFLGRLPVIATLSDLNQQSLVDILTKPKNALVKQYQKLFELDGAELIFEEEALVAIAQKALAKKTGARGLRAILECVLLDTMFELSNLK 383
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ORITB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Orientia tsutsugamushi (strain Boryong) GN=clpX PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.101e-24 Identity = 53/98 (54.08%), Postives = 75/98 (76.53%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL +GLIPEF+GR P++ +L+ L + LV +LT+PKNAL KQY++LF ++ +L F E+AL IA+KA AK TGARGLRAILE +L + M+E+ ++K Sbjct: 286 DLTKFGLIPEFLGRLPVIATLSDLNQQSLVDILTKPKNALVKQYQKLFELDGAELIFEEEALIAIAQKALAKKTGARGLRAILECVLLDTMFELSNLK 383
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_MICLC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Micrococcus luteus (strain ATCC 4698 / IFO 3333 / NCTC 2665) GN=clpX PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.101e-24 Identity = 50/95 (52.63%), Postives = 74/95 (77.89%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR P++ ++ LT +QLV+VLTEPKNAL KQY+++F M+ V+L F + AL + +A A+ TGARGLR+I+E++L M+E+P Sbjct: 301 DLLKFGLIPEFIGRLPVITTVEDLTHEQLVRVLTEPKNALLKQYQKMFLMDGVELEFEQDALDAVVAQAEARGTGARGLRSIMENVLKPVMFELP 395
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ERYLH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Erythrobacter litoralis (strain HTCC2594) GN=clpX PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.101e-24 Identity = 51/97 (52.58%), Postives = 75/97 (77.32%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DL+ +GLIPEFVGR P++ +L L D LV +L EPKNA+ KQY +LF + +V+L FT++AL+ IA++A + TGARGLR+I+E IL + M+++PD+ Sbjct: 292 DLLKFGLIPEFVGRLPVIATLHDLDVDALVTILQEPKNAIVKQYSKLFELEDVELTFTDEALQAIAERAILRKTGARGLRSIVEGILLDTMFDLPDL 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BLOFL (ATP-dependent Clp protease ATP-binding subunit clpX OS=Blochmannia floridanus GN=clpX PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.101e-24 Identity = 58/97 (59.79%), Postives = 73/97 (75.26%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATA-KNTGARGLRAILESILTEAMYEIPD 362 DLI +GLIPEFVGRFP++ L L E +LV +L EPKNAL KQY++LF + VKL F E AL IAK A A K++GARGLR ILE+IL + MY++P+ Sbjct: 304 DLIKFGLIPEFVGRFPVISILNELKESELVAILKEPKNALIKQYQKLFYTDKVKLEFAESALSAIAKCAMATKSSGARGLRTILENILLDMMYDLPN 400
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_AZOSB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Azoarcus sp. (strain BH72) GN=clpX PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.101e-24 Identity = 52/97 (53.61%), Postives = 71/97 (73.20%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DL+ +GLIPEFVGR P++ +L L ED L+++L EPKNAL KQY++LFSM V L AL +A+KA + TGARGLR+ILE+ L + MY++P + Sbjct: 293 DLVKFGLIPEFVGRLPVVATLQELDEDALIQILIEPKNALVKQYQKLFSMEGVDLEIRPAALHAVARKAIKRKTGARGLRSILEAALLDIMYDLPQL 389
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SHESH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella sediminis (strain HAW-EB3) GN=clpX PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24 Identity = 51/98 (52.04%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEF+GR P+L +L L + L+++L+EPKNA+ KQ+ LF M V+L F E AL+ IA KA + TGARGLR+I+E IL + MY++P + Sbjct: 295 DLVKYGLIPEFIGRLPVLATLAELDDAALIQILSEPKNAITKQFAALFDMEGVELEFREDALKAIALKAQTRKTGARGLRSIVEGILLDIMYDLPSTE 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_POLSJ (ATP-dependent Clp protease ATP-binding subunit clpX OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=clpX PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24 Identity = 53/96 (55.21%), Postives = 71/96 (73.96%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPD 362 DLI +GLIPE VGR P++ +L LTED LV++LTEPKNA+ KQ+ +L SM V L AL+ IA+KA A+ TGARGLR+ILE L + M+++P+ Sbjct: 295 DLIKFGLIPELVGRMPVVATLAELTEDALVQILTEPKNAVVKQFSKLLSMEGVDLEIRPSALKAIARKALARKTGARGLRSILEQSLIDTMFDLPN 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_LACRD (ATP-dependent Clp protease ATP-binding subunit clpX OS=Lactobacillus reuteri (strain DSM 20016) GN=clpX PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24 Identity = 50/98 (51.02%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEF+GR P++ +L L ED LV++LTEPKNAL KQY+ L ++ +L FT+ ALR +A+ A +NTGARGLR+I+E ++ + M+++P K Sbjct: 291 DLLKFGLIPEFIGRLPVMTALEKLDEDDLVRILTEPKNALVKQYQELIRLDGSQLTFTDGALRAMAQLAIKRNTGARGLRSIIEDVMRDVMFDLPSRK 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_LACGA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=clpX PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24 Identity = 52/95 (54.74%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR PI+ +L L+ L+++LTEPKNAL KQYK+L S++NV L FTE AL+ IA A +++ GARGLR+I+E+ L + MY P Sbjct: 289 DLVKFGLIPEFIGRIPIITTLDKLSTKDLIRILTEPKNALVKQYKKLLSLDNVDLEFTEGALKAIADMAISRHMGARGLRSIVENSLMDVMYRTP 383 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |