CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_MARAV (ATP-dependent Clp protease ATP-binding subunit clpX OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=clpX PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.407e-27 Identity = 56/95 (58.95%), Postives = 75/95 (78.95%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P++ +LT L E+ LV++LTEPKNAL KQY++LF M V+L F E ALR +A+KA + TGARGLR+I+E+ L + MY+IP Sbjct: 296 DLVKFGLIPEFVGRLPVVATLTELDEEALVQILTEPKNALTKQYQKLFDMEGVELDFREDALRAVARKAMERKTGARGLRSIMEATLLDTMYQIP 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_IDILO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Idiomarina loihiensis GN=clpX PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.407e-27 Identity = 56/98 (57.14%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEF+GR P++ +L L E+ L+++L EPKNAL KQY LF M +V+L F E ALR IAKKA A+ TGARGLR+I+E +L MYE+P ++ Sbjct: 292 DLVRYGLIPEFIGRLPVVATLDELDEEALIEILREPKNALTKQYSALFEMEDVELEFREDALRAIAKKAMARKTGARGLRSIVEGVLLGTMYELPSIE 389
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BUCAT (ATP-dependent Clp protease ATP-binding subunit clpX OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=clpX PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.407e-27 Identity = 58/97 (59.79%), Postives = 74/97 (76.29%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI +GLIPEF+GR PI+ L LTED LV +L +PKNAL KQY+ LF + NVKL F +++++IAKKA KNTGARGLR+I+E IL MYE+P + Sbjct: 299 DLIKFGLIPEFIGRLPIITILNKLTEDALVNILCKPKNALIKQYQTLFELENVKLEFNAESIQLIAKKAINKNTGARGLRSIIEGILLNIMYELPSM 395
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BUCAI (ATP-dependent Clp protease ATP-binding subunit clpX OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=clpX PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.407e-27 Identity = 58/97 (59.79%), Postives = 74/97 (76.29%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI +GLIPEF+GR PI+ L LTED LV +L +PKNAL KQY+ LF + NVKL F +++++IAKKA KNTGARGLR+I+E IL MYE+P + Sbjct: 299 DLIKFGLIPEFIGRLPIITILNKLTEDALVNILCKPKNALIKQYQTLFELENVKLEFNAESIQLIAKKAMNKNTGARGLRSIIEGILLNIMYELPSM 395
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BUCA5 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=clpX PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.407e-27 Identity = 58/97 (59.79%), Postives = 74/97 (76.29%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI +GLIPEF+GR PI+ L LTED LV +L +PKNAL KQY+ LF + NVKL F +++++IAKKA KNTGARGLR+I+E IL MYE+P + Sbjct: 299 DLIKFGLIPEFIGRLPIITILNKLTEDALVNILCKPKNALIKQYQTLFELENVKLEFNAESIQLIAKKAMNKNTGARGLRSIIEGILLNIMYELPSM 395
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ANATD (ATP-dependent Clp protease ATP-binding subunit clpX OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=clpX PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.407e-27 Identity = 56/95 (58.95%), Postives = 77/95 (81.05%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +G+IPEF+GR PI+V+L AL ++ L+K+LTEPKNAL KQY++LF+M+ V+L F + AL IA KA +NTGARGLRAI+E I+ + M+EIP Sbjct: 290 DLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNALVKQYQKLFAMDGVELEFEKDALEAIADKAIERNTGARGLRAIMEEIMLDVMFEIP 384
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_THEPX (ATP-dependent Clp protease ATP-binding subunit clpX OS=Thermoanaerobacter sp. (strain X514) GN=clpX PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.098e-26 Identity = 57/95 (60.00%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +G+IPEF+GR PI+V+L L++D LV++LTEPKNAL KQY++LF ++ VKL F +KAL +IA A + TGARGLRAILE I+ + MYEIP Sbjct: 288 DLLKFGMIPEFIGRVPIVVTLDPLSKDDLVRILTEPKNALTKQYEKLFELDGVKLEFDKKALGLIADMALERKTGARGLRAILEEIMLDVMYEIP 382
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_THEP3 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=clpX PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.098e-26 Identity = 57/95 (60.00%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +G+IPEF+GR PI+V+L L++D LV++LTEPKNAL KQY++LF ++ VKL F +KAL +IA A + TGARGLRAILE I+ + MYEIP Sbjct: 288 DLLKFGMIPEFIGRVPIVVTLDPLSKDDLVRILTEPKNALTKQYEKLFELDGVKLEFDKKALGLIADMALERKTGARGLRAILEEIMLDVMYEIP 382
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SHEON (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella oneidensis GN=clpX PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.098e-26 Identity = 56/97 (57.73%), Postives = 74/97 (76.29%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DL+ YGLIPEF+GR P++ +LT L E+ LV++L+EPKNAL KQY LF M V+L F E AL+ IA KA ++ TGARGLR+I+E IL + MY+IP + Sbjct: 295 DLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYNALFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVEGILLDTMYDIPSI 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SHEAM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=clpX PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.098e-26 Identity = 55/95 (57.89%), Postives = 74/95 (77.89%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ YGLIPEF+GR P++ +L L ED L+++L+EPKNAL KQY LF M NV+L F E AL+ IA+KA ++ TGARGLR+I+E IL + MY++P Sbjct: 294 DLVKYGLIPEFIGRLPVVATLAELDEDALIQILSEPKNALTKQYAALFEMENVELEFREDALKAIAQKAMSRKTGARGLRSIVEGILLDTMYDLP 388 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |