CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CLONN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium novyi (strain NT) GN=clpX PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.136e-23 Identity = 51/95 (53.68%), Postives = 73/95 (76.84%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR PI+V+L +L LV++L EPKNAL KQYK+L M+NV+L F ++AL+ IA +A + TGARGLR+I+E + + M++IP Sbjct: 288 DLLKFGLIPEFIGRLPIMVTLQSLDNSALVRILKEPKNALVKQYKKLLLMDNVELEFEDEALKAIADEAIERKTGARGLRSIIEETMRDIMFDIP 382
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CELJU (ATP-dependent Clp protease ATP-binding subunit clpX OS=Cellvibrio japonicus (strain Ueda107) GN=clpX PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.136e-23 Identity = 51/95 (53.68%), Postives = 70/95 (73.68%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ YGLIPEFVGR P++ +L L + L+++LTEPKNAL KQY +LF M V++ F AL +A++A + TGARGLR+I+ES+L + MY IP Sbjct: 300 DLVRYGLIPEFVGRLPVIATLDELDKAALIQILTEPKNALTKQYGKLFEMEGVQIDFRPDALDAVAERALERKTGARGLRSIMESVLLDTMYRIP 394
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_RHOBA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhodopirellula baltica GN=clpX PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.484e-23 Identity = 51/96 (53.12%), Postives = 71/96 (73.96%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPD 362 D++ +GLIPE VGR P++ L L + L++VLTEPKN+L KQY+ LF+M N +L FTE+AL IAKKA K GARGLR I+E ++ + MY++P+ Sbjct: 342 DILKFGLIPELVGRMPVISYLQPLDLEGLIQVLTEPKNSLVKQYQALFAMENCELEFTEEALHAIAKKAVDKGVGARGLRGIMEDVMLDIMYDLPE 437
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_NOCSJ (ATP-dependent Clp protease ATP-binding subunit clpX OS=Nocardioides sp. (strain BAA-499 / JS614) GN=clpX PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.484e-23 Identity = 49/95 (51.58%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL +GLIPEF+GR P++ S++ L ++ LV++LTEP+NAL KQY++LF ++ V+L FT A+ IA A + TGARGLRAI+E +L MY++P Sbjct: 297 DLTKFGLIPEFIGRLPLIASVSKLDQEALVQILTEPRNALVKQYQKLFELDGVELEFTPDAIEAIADNALERGTGARGLRAIIEEVLLHVMYDVP 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CYAP8 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Cyanothece sp. (strain PCC 8801) GN=clpX PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.484e-23 Identity = 49/98 (50.00%), Postives = 73/98 (74.49%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +G+IPEFVGR P++ SL L E+ L+ +LT+P+NAL KQY++L M+NV+L F + A+R IA++A + TGAR LR I+E ++ + MYE+P K Sbjct: 318 DLVKFGMIPEFVGRIPVMASLEPLDEETLIAILTQPRNALVKQYQKLLKMDNVQLEFNKDAVRAIAQEAYRRKTGARALRGIVEELMLDVMYELPSRK 415
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CORK4 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=clpX PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.484e-23 Identity = 54/96 (56.25%), Postives = 68/96 (70.83%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPD 362 DL+ +GLIPEF+GR P++ ++ L + LV+VLTEPKN+L KQY RL M+ V L E AL IA KA + TGARGLRAILE IL M+E+PD Sbjct: 294 DLVKFGLIPEFIGRLPVVATVNDLDREALVRVLTEPKNSLVKQYSRLLDMDGVTLTMEEGALNAIADKAIERGTGARGLRAILEEILGPVMFEVPD 389
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BACCR (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=clpX PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.484e-23 Identity = 51/98 (52.04%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEF+GR P++ +L L ED LV +LT+PKNAL KQ+++L +++V+L F E AL IAKKA + TGARGLR+I+E ++ + M+E+P K Sbjct: 288 DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLDVMFELPSRK 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BACCN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=clpX PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.484e-23 Identity = 51/98 (52.04%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEF+GR P++ +L L ED LV +LT+PKNAL KQ+++L +++V+L F E AL IAKKA + TGARGLR+I+E ++ + M+E+P K Sbjct: 288 DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLDVMFELPSRK 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BACC4 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus cereus (strain B4264) GN=clpX PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.484e-23 Identity = 51/98 (52.04%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEF+GR P++ +L L ED LV +LT+PKNAL KQ+++L +++V+L F E AL IAKKA + TGARGLR+I+E ++ + M+E+P K Sbjct: 288 DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLDVMFELPSRK 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BACC2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus cereus (strain G9842) GN=clpX PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.484e-23 Identity = 51/98 (52.04%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEF+GR P++ +L L ED LV +LT+PKNAL KQ+++L +++V+L F E AL IAKKA + TGARGLR+I+E ++ + M+E+P K Sbjct: 288 DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLDVMFELPSRK 385 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |