CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ACIAC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=clpX PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.484e-23 Identity = 53/96 (55.21%), Postives = 71/96 (73.96%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPD 362 DLI +GLIPE VGR P++ +L L+ED LV++LTEPKNAL KQY +L +M V+L AL+ IA+KA A+ TGARGLR+ILE L M+++P+ Sbjct: 295 DLIKFGLIPELVGRMPVVTALAELSEDALVQILTEPKNALVKQYSKLLAMEGVELEIRPAALKAIARKALARKTGARGLRSILEQSLIGTMFDLPN 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_VARPS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Variovorax paradoxus (strain S110) GN=clpX PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23 Identity = 53/96 (55.21%), Postives = 70/96 (72.92%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPD 362 DLI +GLIPE VGR P++ SL L+ED LV++LTEPKNA+ KQ+ +L M V L AL+ IA+KA A+ TGARGLR+ILE L + M+E+P+ Sbjct: 295 DLIKFGLIPELVGRMPVVASLAELSEDALVQILTEPKNAVVKQFTKLLQMEGVDLEIRPAALKAIARKALARKTGARGLRSILEQSLIDTMFELPN 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SHEPW (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=clpX PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23 Identity = 50/95 (52.63%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR P+L +L L + L+++L+EPKNA+ KQ+ LF M +V+L F E AL+ IA KA + TGARGLR+I+E IL + MY++P Sbjct: 293 DLVKFGLIPEFIGRLPVLATLAELDDAALIQILSEPKNAITKQFAALFEMEDVELEFREDALKAIALKAQTRKTGARGLRSIVEGILLDIMYDLP 387
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_RAT (ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial OS=Rattus norvegicus GN=Clpx PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23 Identity = 52/96 (54.17%), Postives = 74/96 (77.08%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPD 362 DLI +G+IPEFVGR P++V L +L E LV++LTEP+NA+ QY+ LFSM+ +L+ TE AL+ IA+ A + TGARGLR+I+E +L E M+E+P+ Sbjct: 486 DLIEFGMIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGLRSIMEKLLLEPMFEVPN 581
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_PONAB (ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial OS=Pongo abelii GN=CLPX PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23 Identity = 52/96 (54.17%), Postives = 74/96 (77.08%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPD 362 DLI +G+IPEFVGR P++V L +L E LV++LTEP+NA+ QY+ LFSM+ +L+ TE AL+ IA+ A + TGARGLR+I+E +L E M+E+P+ Sbjct: 486 DLIEFGMIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGLRSIMEKLLLEPMFEVPN 581
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_POLSQ (ATP-dependent Clp protease ATP-binding subunit clpX OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=clpX PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23 Identity = 52/98 (53.06%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPE +GR P++ +L L E+ L+++LTEPKNAL KQY+ L +M +L +AL IAKKA A+ TGARGLR+ILE L + MY++P +K Sbjct: 321 DLIKFGLIPELIGRLPVVATLAQLDEEALIQILTEPKNALVKQYQALLTMEGSELEVRREALSAIAKKAIARKTGARGLRSILEGSLMDVMYDLPSLK 418
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_POLNS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Polynucleobacter necessarius (strain STIR1) GN=clpX PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23 Identity = 52/98 (53.06%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPE +GR P++ +L L E+ L+++LTEPKNAL KQY+ L +M +L +AL IAKKA A+ TGARGLR+ILE L + MY++P +K Sbjct: 321 DLIKFGLIPELIGRLPVVATLAQLDEEALIQILTEPKNALVKQYQALLTMEGSELEVRREALSAIAKKAIARKTGARGLRSILEGSLMDVMYDLPSLK 418
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_MOUSE (ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial OS=Mus musculus GN=Clpx PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23 Identity = 52/96 (54.17%), Postives = 74/96 (77.08%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPD 362 DLI +G+IPEFVGR P++V L +L E LV++LTEP+NA+ QY+ LFSM+ +L+ TE AL+ IA+ A + TGARGLR+I+E +L E M+E+P+ Sbjct: 487 DLIEFGMIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGLRSIMEKLLLEPMFEVPN 582
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_LEGPL (ATP-dependent Clp protease ATP-binding subunit clpX OS=Legionella pneumophila (strain Lens) GN=clpX PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23 Identity = 53/98 (54.08%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL KQ++ LF M +L F ++AL IAKKA + GARGLR+ILE+IL + MY++P ++ Sbjct: 292 DLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNALTKQFQSLFKMEGSELEFRDEALIAIAKKALERKMGARGLRSILENILLDTMYDLPSLE 389
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_LEGPC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Legionella pneumophila (strain Corby) GN=clpX PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23 Identity = 53/98 (54.08%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL KQ++ LF M +L F ++AL IAKKA + GARGLR+ILE+IL + MY++P ++ Sbjct: 292 DLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNALTKQFQSLFKMEGSELEFRDEALIAIAKKALERKMGARGLRSILENILLDTMYDLPSLE 389 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |