CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BURM9 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Burkholderia mallei (strain NCTC 10229) GN=clpX PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.306e-23 Identity = 51/98 (52.04%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY++LF+M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+P +K Sbjct: 294 DLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYQKLFAMERVELEIRPDALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPTLK 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BURM7 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Burkholderia mallei (strain NCTC 10247) GN=clpX PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.306e-23 Identity = 51/98 (52.04%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY++LF+M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+P +K Sbjct: 294 DLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYQKLFAMERVELEIRPDALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPTLK 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_STRAW (ATP-dependent Clp protease ATP-binding subunit clpX OS=Streptomyces avermitilis GN=clpX PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.318e-23 Identity = 49/98 (50.00%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +G+IPEF+GR P++ S+ L + L+++L EP+NAL KQY+RLF ++ V+L F +AL IA +A + TGARGLRAI+E +L MYE+P K Sbjct: 295 DLVKFGMIPEFIGRLPVITSVHNLDREALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRK 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_POLNA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Polaromonas naphthalenivorans (strain CJ2) GN=clpX PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.318e-23 Identity = 51/95 (53.68%), Postives = 70/95 (73.68%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPE VGR P++ +L L+ED LV++LTEPKNA+ KQ+ +L +M V L AL+ IA+KA A+ TGARGLR+ILE L + M+++P Sbjct: 295 DLIKFGLIPELVGRMPVIATLAELSEDALVQILTEPKNAVVKQFSKLLAMEGVDLEIRPSALKAIARKALARKTGARGLRSILEQSLIDTMFDLP 389
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_LACJO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Lactobacillus johnsonii GN=clpX PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.318e-23 Identity = 50/95 (52.63%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR PI+ +L L+ + L+++LTEPKNAL KQYK+L S+++V L FT+ AL+ IA A ++ GARGLR+I+E+ L + MY P Sbjct: 289 DLVKFGLIPEFIGRIPIIATLDKLSTEDLIRILTEPKNALVKQYKKLLSLDDVDLEFTDGALQAIADMAISRRMGARGLRSIVENSLMDVMYRTP 383
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BDEBA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bdellovibrio bacteriovorus GN=clpX PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.318e-23 Identity = 50/95 (52.63%), Postives = 68/95 (71.58%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL +GLIPEF+GR P + L L E+ L+ +L PKNA+ KQY++LFS V+L FTEKALR +A+ A + TGARGLR +LE+ + + MY+IP Sbjct: 293 DLSKFGLIPEFIGRLPAIAVLAPLDEEALLDILVRPKNAITKQYQKLFSFEGVELKFTEKALRAVAQMALKRKTGARGLRGVLETAMLDVMYDIP 387
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_WIGBR (ATP-dependent Clp protease ATP-binding subunit clpX OS=Wigglesworthia glossinidia brevipalpis GN=clpX PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.639e-23 Identity = 54/98 (55.10%), Postives = 70/98 (71.43%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPEFVGR PI+ L L +L+++L +PKNAL KQYK LF++ V+L F E AL IAK++ K TGARGLR+I+E IL + MY +P K Sbjct: 295 DLIKFGLIPEFVGRLPIISVLKELNISELIEILIQPKNALVKQYKLLFNLEGVELEFNENALISIAKESLHKKTGARGLRSIIEHILLDTMYSLPSKK 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_LEGPH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=clpX PE=3 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 5.639e-23 Identity = 53/98 (54.08%), Postives = 70/98 (71.43%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL KQ++ LF M +L F +AL IAKKA + GARGLR+ILE+IL + MY++P ++ Sbjct: 292 DLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNALTKQFQSLFKMEGSELEFRGEALIAIAKKALERKMGARGLRSILENILLDTMYDLPSLE 389
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_GEOMG (ATP-dependent Clp protease ATP-binding subunit clpX OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=clpX PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.639e-23 Identity = 51/95 (53.68%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +G IPEF+GR P+L +L L E +V++L EPK+AL KQY++LF M +VKL FT+ +L IA++A + TGARGLR+ILE+ + + MYEIP Sbjct: 291 DLLKFGFIPEFIGRLPVLATLHELDEAAMVQILKEPKSALVKQYQKLFEMEHVKLKFTDGSLVAIAREALKRKTGARGLRSILENAMLDIMYEIP 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_DEIRA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Deinococcus radiodurans GN=clpX PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.639e-23 Identity = 52/100 (52.00%), Postives = 74/100 (74.00%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP--DVK 368 DL+ +GLIPEFVGR P++V L L ED L+++LTEP+ A+ KQY+ LF V L F+E+AL+ +A +A + TGARGLRA+LE +T+ ++E+P DVK Sbjct: 279 DLVKFGLIPEFVGRLPLVVQLQDLDEDALIRILTEPQGAIIKQYQALFGFQGVDLTFSEEALQEVAHRAKERKTGARGLRAVLEKSMTDLLFELPRDDVK 378 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |