CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BURCH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Burkholderia cenocepacia (strain HI2424) GN=clpX PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.365e-23 Identity = 51/98 (52.04%), Postives = 70/98 (71.43%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+P +K Sbjct: 294 DLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLFAMERVELEIRPGALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPTMK 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BURCC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Burkholderia cenocepacia (strain MC0-3) GN=clpX PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.365e-23 Identity = 51/98 (52.04%), Postives = 70/98 (71.43%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+P +K Sbjct: 294 DLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLFAMERVELEIRPGALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPTMK 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BURCA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Burkholderia cenocepacia (strain AU 1054) GN=clpX PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.365e-23 Identity = 51/98 (52.04%), Postives = 70/98 (71.43%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+P +K Sbjct: 294 DLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLFAMERVELEIRPGALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPTMK 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_MICAN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Microcystis aeruginosa (strain NIES-843) GN=clpX PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.619e-23 Identity = 49/98 (50.00%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +G+IPEFVGR PIL +L+ L E+ L+ +LT+P+NAL KQY++L M+NV+L F A+ IA++A + TGAR LR I+E ++ + MYE+P K Sbjct: 314 DLVKFGMIPEFVGRIPILAALSPLDEEALIAILTQPRNALVKQYQKLLKMDNVQLEFKSDAVLAIAQEAYRRKTGARALRGIVEELMLDVMYELPSRK 411
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_LEIXX (ATP-dependent Clp protease ATP-binding subunit clpX OS=Leifsonia xyli subsp. xyli GN=clpX PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.619e-23 Identity = 49/95 (51.58%), Postives = 70/95 (73.68%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL +GLIPEF+GR P++ ++T L +D L+++LTEPKNAL +QY+R+F ++ V+L F AL IA A + TGARGLRAI+E +L M+E+P Sbjct: 295 DLHKFGLIPEFIGRLPVVTTVTQLDQDALMQILTEPKNALVRQYQRMFELDGVQLEFDHAALEAIADLAVLRKTGARGLRAIMEEVLGPIMFEVP 389
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_HERAR (ATP-dependent Clp protease ATP-binding subunit clpX OS=Herminiimonas arsenicoxydans GN=clpX PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.619e-23 Identity = 52/96 (54.17%), Postives = 68/96 (70.83%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPD 362 DLI +GLIPE VGR P++ +L L E+ L+++L EPKNAL KQY +L M +L AL+ IAKKA A+ TGARGLR+ILE L + MYE+P+ Sbjct: 293 DLIKFGLIPELVGRLPVVATLRELDEEALIQILLEPKNALIKQYSKLLQMEGAELEIRPAALQAIAKKAIARKTGARGLRSILEHALLDVMYELPN 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BURCM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=clpX PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.619e-23 Identity = 51/98 (52.04%), Postives = 70/98 (71.43%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+P +K Sbjct: 294 DLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLFAMERVELEIRPGALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPAMK 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BURA4 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Burkholderia ambifaria (strain MC40-6) GN=clpX PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.619e-23 Identity = 51/98 (52.04%), Postives = 70/98 (71.43%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+P +K Sbjct: 294 DLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLFAMERVELEIRPGALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPAMK 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BUCBP (ATP-dependent Clp protease ATP-binding subunit clpX OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=clpX PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.619e-23 Identity = 52/97 (53.61%), Postives = 70/97 (72.16%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI +GLIPEF+GR PIL L L + LVK+L+EPKNAL KQY+ LF + +V+L K + IA+KA +NTGARGLR+I+E +L + MY +P + Sbjct: 297 DLIKFGLIPEFIGRLPILTILHELDKKMLVKILSEPKNALIKQYQTLFKLEDVELKICTKVIEYIAQKAMNQNTGARGLRSIIEMLLLDTMYRLPSM 393
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX1_METCA (ATP-dependent Clp protease ATP-binding subunit clpX 1 OS=Methylococcus capsulatus GN=clpX1 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.619e-23 Identity = 52/98 (53.06%), Postives = 67/98 (68.37%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI YGLIPEF+GR P++ +L L E LV++L EPKNAL KQY RLF M +L +AL IA++A + TGARGLR I+E L + MYE+P + Sbjct: 293 DLIRYGLIPEFIGRLPVVATLEELDEAALVRILIEPKNALVKQYARLFEMEGCELEILPEALGAIARRAMERKTGARGLRTIIEHALLDTMYELPSAE 390 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |