CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BORA1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bordetella avium (strain 197N) GN=clpX PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.256e-22 Identity = 52/95 (54.74%), Postives = 70/95 (73.68%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPE VGR P++ +L L E LV++LTEPKNAL KQ+++LF+M + +L AL IA+KA + TGARGLR+ILES L + MY++P Sbjct: 293 DLIKFGLIPELVGRLPVVATLDELDEAALVQILTEPKNALIKQFQKLFAMESAELDIRPDALHAIARKALQRKTGARGLRSILESALLDTMYDLP 387
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_STRCO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Streptomyces coelicolor GN=clpX PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.641e-22 Identity = 49/98 (50.00%), Postives = 70/98 (71.43%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +G+IPEF+GR P++ S+ L + L+++L EP+NAL KQY+RLF ++ V+L F AL IA +A + TGARGLRAI+E +L MYE+P K Sbjct: 295 DLVKFGMIPEFIGRLPVITSVHNLDREALLQILVEPRNALVKQYERLFELDGVELDFERGALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRK 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_KOCRD (ATP-dependent Clp protease ATP-binding subunit clpX OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=clpX PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.641e-22 Identity = 49/95 (51.58%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR P++ +L+ L+ +V++LTEP+NAL KQY++LF ++ V+L F +AL IA+ A + TGARGLRAILE IL M+++P Sbjct: 298 DLLKFGLIPEFIGRLPVVATLSKLSVADMVRILTEPRNALVKQYRKLFQLDGVELTFDPQALEAIAELALERGTGARGLRAILEDILMPVMFDLP 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX1_WOLSU (ATP-dependent Clp protease ATP-binding subunit clpX 1 OS=Wolinella succinogenes GN=clpX1 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.641e-22 Identity = 46/98 (46.94%), Postives = 75/98 (76.53%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL++YGLIPE +GR ++ +L +T++ ++++LT+PKNAL KQY++LF+M+ +L F +AL IA+ A + TGARGLRAI+E + + MY++P++K Sbjct: 289 DLVSYGLIPELIGRLHVITTLDEITKEAMLEILTKPKNALVKQYQKLFTMDEAELSFEPEALEAIAELAIKRKTGARGLRAIIEEVTLDLMYDLPELK 386
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_RICAH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rickettsia akari (strain Hartford) GN=clpX PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.143e-22 Identity = 49/98 (50.00%), Postives = 73/98 (74.49%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL +GLIPEF+GR PI+ +L L ++ L+ +LT+PKNA+ KQYK+ F +++ +L AL IA+KA AK TGARGLR+ILE +L ++MY++ ++K Sbjct: 289 DLTKFGLIPEFIGRLPIVTTLDELDKEALITILTKPKNAIVKQYKKQFELDDTELVIENSALEAIAEKALAKKTGARGLRSILEHLLLDSMYKVAELK 386
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ACAM1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acaryochloris marina (strain MBIC 11017) GN=clpX PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.143e-22 Identity = 49/95 (51.58%), Postives = 70/95 (73.68%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +G+IPEF GR P++ + AL ED L ++LTEP+NAL KQY++L M+ V+L F A+R IA++A + TGAR LRAI+E I+ + MYE+P Sbjct: 315 DLVKFGMIPEFTGRIPVMSVIDALDEDVLCQILTEPRNALVKQYQKLLRMDRVELEFQPDAIRAIAQEAYRRRTGARALRAIVEEIMLDVMYELP 409
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_TROWT (ATP-dependent Clp protease ATP-binding subunit clpX OS=Tropheryma whipplei (strain Twist) GN=clpX PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.799e-22 Identity = 49/95 (51.58%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL +GLIPEF+GR PI+ +++ L + +++VLTEPKNAL KQYKRLFS++ V L F +AL I + A + TGAR LR+++ESIL+ M+++P Sbjct: 294 DLRKFGLIPEFIGRLPIVTAISHLDGEDMIRVLTEPKNALVKQYKRLFSLDGVSLGFDHEALEAIVELALKRKTGARALRSVMESILSPIMFDVP 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_TROW8 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Tropheryma whipplei (strain TW08/27) GN=clpX PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.799e-22 Identity = 49/95 (51.58%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL +GLIPEF+GR PI+ +++ L + +++VLTEPKNAL KQYKRLFS++ V L F +AL I + A + TGAR LR+++ESIL+ M+++P Sbjct: 294 DLRKFGLIPEFIGRLPIVTAISHLDGEDMIRVLTEPKNALVKQYKRLFSLDGVSLGFDHEALEAIVELALKRKTGARALRSVMESILSPIMFDVP 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_TRIEI (ATP-dependent Clp protease ATP-binding subunit clpX OS=Trichodesmium erythraeum (strain IMS101) GN=clpX PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.799e-22 Identity = 49/98 (50.00%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPE +GR P++ + L E+ L+ +LT+P+NAL KQY++L M+NVKL F E A+R IAK+A + TGAR LR I+E ++ + MYE+P K Sbjct: 319 DLVKFGLIPELIGRIPMVAVVEPLDEETLMAILTKPQNALVKQYQKLLRMDNVKLEFEEDAVRAIAKEAFRRKTGARALRGIVEELMLDVMYELPSRK 416
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_RALEJ (ATP-dependent Clp protease ATP-binding subunit clpX OS=Ralstonia eutropha (strain JMP134) GN=clpX PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.799e-22 Identity = 51/98 (52.04%), Postives = 69/98 (70.41%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPE +GR P++ +L L E LV++L EPKNAL KQY++L +M V+L AL IA+KA + TGARGLR+ILE L + MY++P+ K Sbjct: 295 DLIKFGLIPELIGRLPVVATLAKLDETALVQILIEPKNALVKQYQKLLAMEGVELEIRPAALSAIARKAIRRKTGARGLRSILEQSLMDVMYDLPNYK 392 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |