CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_RHOPT (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhodopseudomonas palustris (strain TIE-1) GN=clpX PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.098e-26 Identity = 57/98 (58.16%), Postives = 77/98 (78.57%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEFVGR P++ +L L E+ L K+LT+PKNAL KQY+RLF M NV+L F ++AL +A+KA + TGARGLR+ILESIL E M+++P ++ Sbjct: 291 DLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTDPKNALVKQYQRLFEMENVELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLPGLE 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_RHOPA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhodopseudomonas palustris GN=clpX PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.098e-26 Identity = 57/98 (58.16%), Postives = 77/98 (78.57%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEFVGR P++ +L L E+ L K+LT+PKNAL KQY+RLF M NV+L F ++AL +A+KA + TGARGLR+ILESIL E M+++P ++ Sbjct: 291 DLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTDPKNALVKQYQRLFEMENVELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLPGLE 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_RHIL3 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=clpX PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.098e-26 Identity = 56/98 (57.14%), Postives = 78/98 (79.59%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M +V+L+F E ALR IA+KA + TGARGLR+I+E IL + M+E+P ++ Sbjct: 294 DLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELNFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPTLE 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_DICTD (ATP-dependent Clp protease ATP-binding subunit clpX OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=clpX PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.098e-26 Identity = 55/97 (56.70%), Postives = 78/97 (80.41%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI +G+IPEFVGRFP++ L L+E+ L+K+LTEPKNAL KQYK L SM V+++FT++AL+ I K+A K TGARGLRA++E ++ + MYE+P++ Sbjct: 287 DLIKFGMIPEFVGRFPVVAVLEPLSEEALLKILTEPKNALVKQYKALLSMEGVEINFTDEALKAIVKEAIDKATGARGLRAVMEELMLDLMYELPNL 383
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CLOBB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=clpX PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.098e-26 Identity = 57/95 (60.00%), Postives = 77/95 (81.05%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR PILV+L +L +D L+ +LT+PKNAL KQYK+LF +++V+L F +AL IA++A + TGARGLRAI+E ++TE MYEIP Sbjct: 288 DLLKFGLIPEFVGRLPILVTLESLDKDALINILTKPKNALVKQYKKLFELDDVELEFNNEALTSIAEEAIERKTGARGLRAIIEEMMTEIMYEIP 382
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CLOBA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=clpX PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.098e-26 Identity = 57/95 (60.00%), Postives = 77/95 (81.05%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR PILV+L +L +D L+ +LT+PKNAL KQYK+LF +++V+L F +AL IA++A + TGARGLRAI+E ++TE MYEIP Sbjct: 288 DLLKFGLIPEFVGRLPILVTLESLDKDALINILTKPKNALVKQYKKLFELDDVELEFNNEALTSIAEEAIERKTGARGLRAIIEEMMTEIMYEIP 382
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CLOTH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=clpX PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.434e-26 Identity = 57/95 (60.00%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P++V+L +L + LVK+LTEPKNAL KQY++LF M++V L F ++A+ IA KA +NTGARGLRAILE I+ + MY+IP Sbjct: 289 DLLKFGLIPEFVGRLPVIVTLHSLDREALVKILTEPKNALVKQYQKLFEMDDVILEFEKEAIEAIADKAIERNTGARGLRAILEEIMLDVMYDIP 383
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CLOPS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium perfringens (strain SM101 / Type A) GN=clpX PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.434e-26 Identity = 57/95 (60.00%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P+LV+L AL + LV +LT+PKNAL KQYK+LF ++NVKL FTE+AL+ IA +A + TGARGLRAI+E + + M++IP Sbjct: 291 DLLKFGLIPEFVGRLPVLVTLEALDNEALVSILTKPKNALVKQYKKLFELDNVKLDFTEEALKAIADEAINRKTGARGLRAIVEETMMDIMFDIP 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CLOPE (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium perfringens GN=clpX PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.434e-26 Identity = 57/95 (60.00%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P+LV+L AL + LV +LT+PKNAL KQYK+LF ++NVKL FTE+AL+ IA +A + TGARGLRAI+E + + M++IP Sbjct: 291 DLLKFGLIPEFVGRLPVLVTLEALDNEALVSILTKPKNALVKQYKKLFELDNVKLDFTEEALKAIADEAINRKTGARGLRAIVEETMMDIMFDIP 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CLOP1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=clpX PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.434e-26 Identity = 57/95 (60.00%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P+LV+L AL + LV +LT+PKNAL KQYK+LF ++NVKL FTE+AL+ IA +A + TGARGLRAI+E + + M++IP Sbjct: 291 DLLKFGLIPEFVGRLPVLVTLEALDNEALVSILTKPKNALVKQYKKLFELDNVKLDFTEEALKAIADEAINRKTGARGLRAIVEETMMDIMFDIP 385 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |