CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CAUCR (ATP-dependent Clp protease ATP-binding subunit clpX OS=Caulobacter crescentus GN=clpX PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.434e-26 Identity = 63/118 (53.39%), Postives = 78/118 (66.10%), Query Frame = 3 Query: 12 FGTRVTDAAXXXXXXXXXXXX--DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 FG +VTD DL +GLIPEF+GR P++ +L L E LVK+LTEPKNA KQY+RLF M N+ L FTE AL +AKKA A+ TGARGLR+I+E IL E M+E+P Sbjct: 268 FGAKVTDPEERRTGEILRNVEPDDLQRFGLIPEFIGRLPVVATLEDLDEAALVKILTEPKNAFVKQYQRLFEMENIGLTFTEDALHQVAKKAIARKTGARGLRSIMEGILLETMFELP 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CAUCN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=clpX PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.434e-26 Identity = 63/118 (53.39%), Postives = 78/118 (66.10%), Query Frame = 3 Query: 12 FGTRVTDAAXXXXXXXXXXXX--DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 FG +VTD DL +GLIPEF+GR P++ +L L E LVK+LTEPKNA KQY+RLF M N+ L FTE AL +AKKA A+ TGARGLR+I+E IL E M+E+P Sbjct: 268 FGAKVTDPEERRTGEILRNVEPDDLQRFGLIPEFIGRLPVVATLEDLDEAALVKILTEPKNAFVKQYQRLFEMENIGLTFTEDALHQVAKKAIARKTGARGLRSIMEGILLETMFELP 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BRASO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bradyrhizobium sp. (strain ORS278) GN=clpX PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.434e-26 Identity = 56/98 (57.14%), Postives = 77/98 (78.57%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEFVGR P++ +L L E+ L K+LTEPKNAL KQY+RLF M N++L F ++AL +++KA + TGARGLR+ILESIL E M+++P ++ Sbjct: 291 DLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNALVKQYQRLFEMENIELTFADEALGAVSRKAIERKTGARGLRSILESILLETMFDLPGLE 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BAUCH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=clpX PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.434e-26 Identity = 55/95 (57.89%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF++ V+L F+E+AL IAKKA A+ TGARGLR+I+E IL E MYE+P Sbjct: 294 DLVKFGLIPEFIGRLPVVATLNELSEEALIRILREPKNALTKQYQALFNLEGVELEFSEEALIAIAKKAMARKTGARGLRSIVEGILLETMYELP 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BARQU (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bartonella quintana GN=clpX PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.434e-26 Identity = 59/98 (60.20%), Postives = 77/98 (78.57%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPEF+GR PI+ +L L + LV++L++PKNAL KQY+RLF M NV+L F E ALRVIAKKA + TGARGLR+I+E IL E M+E+P ++ Sbjct: 293 DLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSQPKNALVKQYQRLFEMENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFELPTLE 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ACIBY (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain AYE) GN=clpX PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.434e-26 Identity = 54/95 (56.84%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+M NV L F + ALR +AK+A +NTGARGLR+ILE++L E MY++P Sbjct: 292 DLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLP 386
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ACIBT (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=clpX PE=3 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.434e-26 Identity = 54/95 (56.84%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+M NV L F + ALR +AK+A +NTGARGLR+ILE++L E MY++P Sbjct: 292 DLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLP 386
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ACIBS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain SDF) GN=clpX PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.434e-26 Identity = 54/95 (56.84%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+M NV L F + ALR +AK+A +NTGARGLR+ILE++L E MY++P Sbjct: 292 DLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLP 386
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ACIBC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain ACICU) GN=clpX PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.434e-26 Identity = 54/95 (56.84%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+M NV L F + ALR +AK+A +NTGARGLR+ILE++L E MY++P Sbjct: 292 DLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLP 386
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ACIB5 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain AB0057) GN=clpX PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.434e-26 Identity = 54/95 (56.84%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+M NV L F + ALR +AK+A +NTGARGLR+ILE++L E MY++P Sbjct: 292 DLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLP 386 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |