CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ACIB3 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain AB307-0294) GN=clpX PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.434e-26 Identity = 54/95 (56.84%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+M NV L F + ALR +AK+A +NTGARGLR+ILE++L E MY++P Sbjct: 292 DLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLP 386
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_YERPS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Yersinia pseudotuberculosis GN=clpX PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.873e-26 Identity = 54/97 (55.67%), Postives = 77/97 (79.38%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI +GLIPEF+GR P++ +L+ L+ED L+++L EPKNAL KQY+ LFS+ V+L F ++AL IAKKA A+ TGARGLR+I+E +L + MY++P + Sbjct: 294 DLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGVLLDTMYDLPSM 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SINMW (ATP-dependent Clp protease ATP-binding subunit clpX OS=Sinorhizobium medicae (strain WSM419) GN=clpX PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.873e-26 Identity = 55/98 (56.12%), Postives = 78/98 (79.59%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M +V+L+F E ALR IA++A + TGARGLR+I+E IL + M+E+P ++ Sbjct: 294 DLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELNFHEDALREIARRAIVRKTGARGLRSIMEKILLDTMFELPTLE 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_RHIME (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium meliloti GN=clpX PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.873e-26 Identity = 55/98 (56.12%), Postives = 78/98 (79.59%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M +V+L+F E ALR IA++A + TGARGLR+I+E IL + M+E+P ++ Sbjct: 294 DLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELNFHEDALREIARRAIVRKTGARGLRSIMEKILLDTMFELPTLE 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BEII9 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=clpX PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.873e-26 Identity = 56/95 (58.95%), Postives = 75/95 (78.95%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P++ +L L E+ L K+LTEPKNAL KQY+RLF M N +L F ++AL V+AKKA + TGARGLR+I+ESIL + M+++P Sbjct: 291 DLLKFGLIPEFVGRLPVIATLEDLDEEALKKILTEPKNALVKQYQRLFEMENTELTFQDEALNVVAKKAIERKTGARGLRSIMESILLDTMFDLP 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_VIBSL (ATP-dependent Clp protease ATP-binding subunit clpX OS=Vibrio splendidus (strain LGP32) GN=clpX PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.446e-26 Identity = 56/95 (58.95%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL KQY LF + + +L F E ALR IAKKA + TGARGLR+ILE +L E MYE+P Sbjct: 296 DLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAALFELEDTELEFREDALRAIAKKAMNRKTGARGLRSILEGVLLETMYELP 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_THISH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=clpX PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.446e-26 Identity = 56/98 (57.14%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI YGLIPEFVGR P++ +L L ED L+++LTEPKNAL KQY +LF M V + F E ALR +A KA + TGARGLR ILE +L + MY++P + Sbjct: 294 DLIKYGLIPEFVGRLPVVATLEELDEDALIQILTEPKNALTKQYGKLFEMEGVDIEFREDALRAVAAKAMERKTGARGLRTILEQVLLDTMYDLPSTE 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SILST (ATP-dependent Clp protease ATP-binding subunit clpX OS=Silicibacter sp. (strain TM1040) GN=clpX PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.446e-26 Identity = 56/99 (56.57%), Postives = 77/99 (77.78%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKT 371 DL+ +GLIPEFVGR P+L +L L ED L+ +LT+PKNAL KQY+RLF + + +L FT++AL IAKKA + TGARGLR+ILE IL + M+E+P +++ Sbjct: 292 DLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKNALVKQYQRLFELEDTELDFTDEALSAIAKKAIERKTGARGLRSILEDILLDTMFELPGMES 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_RHILW (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=clpX PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.446e-26 Identity = 56/98 (57.14%), Postives = 77/98 (78.57%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M +V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+P ++ Sbjct: 294 DLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELTFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPTLE 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_RHIEC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=clpX PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.446e-26 Identity = 56/98 (57.14%), Postives = 77/98 (78.57%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M +V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+P ++ Sbjct: 294 DLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELTFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPTLE 391 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |