CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_RHOP2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhodopseudomonas palustris (strain HaA2) GN=clpX PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26 Identity = 56/98 (57.14%), Postives = 76/98 (77.55%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL KQY+RLF M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++P ++ Sbjct: 291 DLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLPGLE 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_RHISN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium sp. (strain NGR234) GN=clpX PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26 Identity = 56/98 (57.14%), Postives = 77/98 (78.57%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M +V+L F E ALR IAK+A + TGARGLR+I+E IL + M+E+P ++ Sbjct: 294 DLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELTFHEDALREIAKRAIIRKTGARGLRSIMEKILLDTMFELPTLE 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_OCEIH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Oceanobacillus iheyensis GN=clpX PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26 Identity = 54/95 (56.84%), Postives = 78/95 (82.11%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ YGLIPEF+GR P++ SLT L E+ L+++LT+PKNAL KQY++LF +++V+L F E+AL+ IAKKA + TGARGLR+I+E I+ + M++IP Sbjct: 288 DLLRYGLIPEFIGRIPVIGSLTPLDEEALIEILTKPKNALVKQYQKLFEIDHVELEFEEEALQEIAKKAIERKTGARGLRSIIEGIIVDVMFDIP 382
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_NITWN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=clpX PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26 Identity = 56/98 (57.14%), Postives = 76/98 (77.55%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL KQY+RLF M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++P ++ Sbjct: 291 DLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLPGLE 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_METEP (ATP-dependent Clp protease ATP-binding subunit clpX OS=Methylobacterium extorquens (strain PA1) GN=clpX PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26 Identity = 56/99 (56.57%), Postives = 78/99 (78.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKT 371 DL+ +GLIPEFVGR P+L +L L E+ L K+L EPKNAL KQY+RLF M NV+L F ++AL ++A+KA + TGARGLR+ILE+IL + MY++P +++ Sbjct: 291 DLLKFGLIPEFVGRLPVLATLEDLDEEALKKILQEPKNALVKQYQRLFEMENVELTFQDEALSLVARKAIERKTGARGLRSILETILLDTMYDLPGLES 389
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_METC4 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=clpX PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26 Identity = 56/99 (56.57%), Postives = 78/99 (78.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKT 371 DL+ +GLIPEFVGR P+L +L L E+ L K+L EPKNAL KQY+RLF M NV+L F ++AL ++A+KA + TGARGLR+ILE+IL + MY++P +++ Sbjct: 291 DLLKFGLIPEFVGRLPVLATLEDLDEEALKKILQEPKNALVKQYQRLFEMENVELTFQDEALSLVARKAIERKTGARGLRSILETILLDTMYDLPGLES 389
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_MAGSM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Magnetococcus sp. (strain MC-1) GN=clpX PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26 Identity = 56/95 (58.95%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+A+GLIPEFVGR P++ +L L+++ LV++LTEPKNAL KQY++L M NVKL FT+ AL +A++A + TGARGLRA+LES L + M+EIP Sbjct: 292 DLLAFGLIPEFVGRLPVVATLEELSKEALVRILTEPKNALVKQYQKLLEMENVKLTFTDGALEALAQRAIERKTGARGLRALLESTLLDIMFEIP 386
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_EUBE2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=clpX PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26 Identity = 56/99 (56.57%), Postives = 77/99 (77.78%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKT 371 DLI +GLIPEFVGR P++VSL +L E+ LV++L EPKNA+ KQY+ LF ++ V L FT++A+ +A K+ + TGARGLR+ILES++ E MYEIP +T Sbjct: 294 DLIKFGLIPEFVGRVPVVVSLDSLDEEALVRILKEPKNAIIKQYQALFGLDEVALEFTDEAVEAVAHKSFERKTGARGLRSILESVMNEVMYEIPSDET 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_DICT6 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=clpX PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26 Identity = 55/97 (56.70%), Postives = 77/97 (79.38%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI +G+IPEFVGRFP++ L L+E+ L+K+LTEPKNAL KQYK L S+ V++ FT++ALR I K+A K TGARGLRA++E ++ + MYE+P++ Sbjct: 287 DLIKFGMIPEFVGRFPVVAVLEPLSEEALLKILTEPKNALVKQYKALLSIEGVEIDFTDEALRSIVKEALEKATGARGLRAVMEELMLDLMYELPNL 383
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ZYMMO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Zymomonas mobilis GN=clpX PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.173e-26 Identity = 56/98 (57.14%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEFVGR P+L +L L + LV++LTEPKNAL KQY++LF + + KL FTE AL IAKK + TGARGLR+ILE IL + M+E+P ++ Sbjct: 291 DLLKFGLIPEFVGRLPVLATLEDLDQSALVRILTEPKNALVKQYQKLFELEDAKLEFTEDALAAIAKKGIERKTGARGLRSILEGILLDTMFELPSLE 388 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |