CX299941
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA2_GEOSL (Glycogen synthase 2 OS=Geobacter sulfurreducens GN=glgA2 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 47/105 (44.76%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 306 SRFEPCGL QL AMRYGTVP+V TGGL DTV EG TGF F+ D A + RALA Y ++ +M+ GM +D+SW A ++E Sbjct: 379 SRFEPCGLSQLIAMRYGTVPVVRHTGGLRDTVVDVTRHPREG-TGFTFEDFTAD----------ACWEAIERALAGYRDRESWRRIMRRGMHRDVSWHNAAGRYE 472
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA1_METCA (Glycogen synthase 1 OS=Methylococcus capsulatus GN=glgA1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.472e-12 Identity = 42/97 (43.30%), Postives = 56/97 (57.73%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKW 303 SRFEPCGL QL++ RYGTVPIV GGL DTVE+ T ++ + +P A + V RALA Y + + K GMA+D SW+ A ++ Sbjct: 374 SRFEPCGLNQLYSQRYGTVPIVRKVGGLADTVEDA-TPERLAAGQASGIVFEPAKPAFLLEAVYRALALYREPEVWRAVCKCGMAKDFSWRKSASRY 469
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA_ANASK (Glycogen synthase OS=Anaeromyxobacter sp. (strain K) GN=glgA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12 Identity = 41/103 (39.81%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 306 SRFEPCGL Q++++RYGTVP+V + GGL DTVE+ TGF+ ++ A+ T RRAL + +A +++ GMA+D SW+ A ++E Sbjct: 375 SRFEPCGLNQMYSLRYGTVPVVRAVGGLADTVEDFDGVARGTGFRFSEYTPQ----------ALLTATRRALDVFRDRRAWRGLVERGMAEDNSWERSAARYE 467
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: SSY1_WHEAT (Starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WSSI-2 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.508e-12 Identity = 42/100 (42.00%), Postives = 59/100 (59.00%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ--ALAEMMKNGMAQDLSWKGPAKKWEE 309 SRFEPCGL QL+AM+YGTVP+V TGGL DTVE F F A P+ V + +R A++T+ + +MK GM +D +W A+++E+ Sbjct: 536 SRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTVET-FNPFGAKGEEGTGWAFSPLTVDKMLWALRTAMSTFREHKPSWEGLMKRGMTKDHTWDHAAEQYEQ 634
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA_SYNSC (Glycogen synthase OS=Synechococcus sp. (strain CC9605) GN=glgA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.508e-12 Identity = 50/130 (38.46%), Postives = 66/130 (50.77%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 399 SRFEPCG+ QL+AMRYG+VP+V GGLVDTV G+ F D +PVD + VR A + E+ K GM QD SW A ++ L+ +V G EP D + ++ A P Sbjct: 355 SRFEPCGISQLYAMRYGSVPVVRKVGGLVDTVPPHIPAADSGTGFCFD--RFEPVDF--YTALVRAWEAFRHRDSWTELQKRGMNQDYSWDRSAVDYD--LMYKDVCGIKEPTPDAALVEQFSQGQAADP 478
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA_RHILW (Glycogen synthase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=glgA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.508e-12 Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 303 SRFEPCGL QL+ +RYG VPIVA TGGL DTV + + + PV + +RRA+ Y + L ++ K GM D+SW+ A+++ Sbjct: 373 SRFEPCGLTQLYGLRYGCVPIVARTGGLNDTVIDANHAALAAKVATGIQ-FSPVTETGMLQAIRRAMHFYADRKLWTQLQKQGMKSDVSWEKSAERY 468
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA_RHIE6 (Glycogen synthase OS=Rhizobium etli (strain CIAT 652) GN=glgA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.508e-12 Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 303 SRFEPCGL QL+ +RYG VPIVA TGGL DTV + + + PV + +RRA+ Y + L ++ K GM D+SW+ A+++ Sbjct: 373 SRFEPCGLTQLYGLRYGCVPIVARTGGLNDTVIDANHAALAAKVATGIQ-FSPVTETGLLQAIRRAMHFYADRKLWTQLQKQGMKSDVSWEKSAERY 468
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA_THISH (Glycogen synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=glgA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12 Identity = 40/97 (41.24%), Postives = 56/97 (57.73%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 303 SRFEPCGL Q++++RYGTVP+V +TGGL DTV + + + D A++ + RALA Y A +M+ GMAQD SW A+ + Sbjct: 379 SRFEPCGLNQMYSLRYGTVPVVRNTGGLADTVVDADPAHLAARDATGIQ-FDEATPQALADALARALALYHDPACWKRLMQAGMAQDFSWGRSAEAY 474
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA_SYNPW (Glycogen synthase OS=Synechococcus sp. (strain WH7803) GN=glgA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12 Identity = 49/135 (36.30%), Postives = 68/135 (50.37%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 399 SRFEPCG+ QL+AMRYG VP+V GGLVDTV ++ TGF F +PVD + VR A ++ E+ + GM QD SW A +++ + +V G EP D + ++ A P Sbjct: 355 SRFEPCGISQLYAMRYGCVPVVRKVGGLVDTVPPHDPRQKSGTGFCFDRF-------EPVDF--YTALVRAWEAFRHPESWKELQRRGMEQDYSWARSALEYDR--MYRDVCGLKEPSPDAAAVEQFSQGQEADP 478
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: SSY21_ORYSJ (Soluble starch synthase 2-1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-1 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 45/103 (43.69%), Postives = 54/103 (52.43%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 318 SRFEPCGL QL+AM YGTVP+V + GGL DTVE + +G EA +D R T + + K GM QDLSW AK +EE LL Sbjct: 645 SRFEPCGLNQLYAMMYGTVPVVHAVGGLRDTVEHYNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRT----SWEGLQKRGMMQDLSWDNAAKLYEEVLL 743 The following BLAST results are available for this feature:
BLAST of CX299941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299941 ID=CX299941; Name=CX299941; organism=Citrus clementina; type=EST; length=680bpback to top |