CX299941
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA_RHILO (Glycogen synthase OS=Rhizobium loti GN=glgA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 38/99 (38.38%), Postives = 54/99 (54.55%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEE 309 SRFEPCGL QL+ +RYG VP+VA TGGL DT+ + + + P + A+ +RR + Y A E + + GM D+SW A+K+ E Sbjct: 373 SRFEPCGLTQLYGLRYGCVPVVARTGGLADTIIDANEAAMAAGVATGLQFA-PNNGGAMLHAIRRLVDAYADPAAFETIQRQGMKADVSWDKSAEKYLE 470
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA_DESAP (Glycogen synthase OS=Desulforudis audaxviator (strain MP104C) GN=glgA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 42/115 (36.52%), Postives = 61/115 (53.04%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEETLLN-LEVAGSEPGI 351 SRFEPCGL QL ++RYGT+PIV TGGL DTV E + + + + D A+ + + RAL Y +A +++N M D SW A ++ + + +E E GI Sbjct: 387 SRFEPCGLGQLISLRYGTIPIVRETGGLADTVNE----YDLATGGGNGFVFKEYDARALYSAIARALKLYREDQEAWGRLVRNAMEMDFSWARSAVEYLQVYRDAMEKVSEERGI 497
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA_DEIGD (Glycogen synthase OS=Deinococcus geothermalis (strain DSM 11300) GN=glgA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 42/97 (43.30%), Postives = 53/97 (54.64%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKW 303 SRFEPCGL Q+ A+RYGT+PIV TGGLVDTV G GF+ + + A++T R A T MK GM D SW+G A+ + Sbjct: 351 SRFEPCGLSQMIALRYGTLPIVRETGGLVDTV-PGDVGFRFADATTE----------ALATACRDARTTLEDVVEWQSRMKRGMELDFSWEGSARHY 436
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA_CLOPH (Glycogen synthase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=glgA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 44/106 (41.51%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA--EMMKNGMAQDLSWKGPAKKWEE 309 S FEPCGL QL ++RYGTVPIV TGGLVDTV E TGF +++ + T+R A Y + +++ GMA+D SWK A+K+EE Sbjct: 378 SLFEPCGLSQLMSLRYGTVPIVRETGGLVDTVEPYNQHESTGTGFTFKNYNAH----------EMLYTIRFAKEIYQDKKREWNKIIDRGMAKDFSWKTSARKYEE 473
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA_AZOSE (Glycogen synthase OS=Azoarcus sp. (strain EbN1) GN=glgA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 45/112 (40.18%), Postives = 62/112 (55.36%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-GFTGFQMGSFS--VDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGS 339 SRFEPCGL Q+++ RYGT PIV +TGGLVD+V + G G S + EA AA+ V RAL + + A + NGMA+D SW G A ++ + + A + Sbjct: 386 SRFEPCGLNQMYSQRYGTPPIVRATGGLVDSVGDFSVDGLHRGEASGFLFAEATP----AALVEAVDRALKVFADRVAWRTLCCNGMARDFSWGGSAGRYARLYVAMRAAAA 493
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA_AGRRK (Glycogen synthase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=glgA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 37/97 (38.14%), Postives = 54/97 (55.67%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 303 SRFEPCGL QL+ +RYG VPIVA TGGL DT+ + + + PV + +RRA+ + + + +M K GM D+SW A+++ Sbjct: 373 SRFEPCGLTQLYGLRYGCVPIVARTGGLNDTIIDANHAALQAKVATGIQ-FSPVTAEGLLQAIRRAIYLFQDRKVWTQMQKQGMKSDVSWGKSAERY 468
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA1_RHIME (Glycogen synthase 1 OS=Rhizobium meliloti GN=glgA1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 39/100 (39.00%), Postives = 52/100 (52.00%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEA---VDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 303 SRFEPCGL QL+ +RYG VP+VA TGGL DT+ + + S C PV + +RR L Y L A + GM D+SW A+++ Sbjct: 374 SRFEPCGLTQLYGLRYGCVPVVARTGGLTDTIIDA----NEAALSAKCATGFHFLPVTTDGLRLAIRRVLRAYNEPKLWARLQYQGMKSDVSWAKSAERY 469
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA1_GEOSL (Glycogen synthase 1 OS=Geobacter sulfurreducens GN=glgA1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 41/107 (38.32%), Postives = 61/107 (57.01%), Query Frame = 1 Query: 1 FYFDSSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 309 F+ S FEPCGL Q++++RYGT+PIV +TGGL D+V E+ TG +S D +A+ V T RR A+A ++ N MA+ +W+ A ++EE Sbjct: 380 FFVMPSAFEPCGLNQMYSLRYGTLPIVRATGGLDDSVENFDEQNLTGNGFKFWSHDADALFDTVGWTVHTWYRR------KDAMAALIGNAMAKRFTWEDSAARYEE 480
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA_SYNS9 (Glycogen synthase OS=Synechococcus sp. (strain CC9902) GN=glgA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 48/130 (36.92%), Postives = 68/130 (52.31%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 399 SRFEPCG+ QL+AMRYG+VP+V + GGLVDTV G+ F D +PVD + VR A + ++ K GM +D SW A +++ L+ +V G EP D + ++ A P Sbjct: 355 SRFEPCGISQLYAMRYGSVPVVRNVGGLVDTVPPHDPNADRGTGFCFD--RFEPVDF--YTALVRAWEAYRHRSSWQDLQKRGMTEDYSWDRSAVEYD--LMYKDVCGIKEPTPDAALLEQFSRGQDADP 478
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA_PROM1 (Glycogen synthase OS=Prochlorococcus marinus (strain NATL1A) GN=glgA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 50/130 (38.46%), Postives = 67/130 (51.54%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 399 SRFEPCG+ QL AMRYG +PIV GGLVDTVE + GS F D +P+D ++ VR A ++ E+ M+ SW AK++E L+ +V G EP D E+ + A P Sbjct: 355 SRFEPCGISQLLAMRYGAIPIVRKVGGLVDTVEPYNPMNETGSGFCFD--RYEPIDF--YTSLVRSWEAYRHQKSWKELQLRAMSNKYSWDRSAKEYE--LMYKDVCGIKEPSPDAAEVEKFSYGQEADP 478 The following BLAST results are available for this feature:
BLAST of CX299941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299941 ID=CX299941; Name=CX299941; organism=Citrus clementina; type=EST; length=680bpback to top |