CX299943
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_VIBF1 (Glycine cleavage system H protein OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=gcvH PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.682e-30 Identity = 62/122 (50.82%), Postives = 85/122 (69.67%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 LK+ +SHEWV+ G TVGI+DHAQ LG+VVFV+LPE V G GF +VESVKA SD+ SP++G ++E+N +L ++P LVN PYE GW+ ++K S S+LESL+ Y + +EE Sbjct: 5 LKFTTSHEWVRDNGDGTVTVGISDHAQGLLGDVVFVDLPEVDDEVTTGEGFSLVESVKAASDIYSPVTGVIVEINEELEDSPELVNEEPYESGWIARIKLSDSSELESLIPSDTYLESLDEE 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_THET8 (Glycine cleavage system H protein OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=gcvH PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.682e-30 Identity = 60/119 (50.42%), Postives = 79/119 (66.39%), Query Frame = 1 Query: 154 YASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 Y +HEW EG VGITD+AQD LG+VV+VELPE G V++G VVESVK SD+ +P++GE++EVN L +TP LVN PY EGW+ ++KP DL+ L+D Y + E E Sbjct: 9 YTKTHEWALPEGDTVLVGITDYAQDALGDVVYVELPEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVNLALEKTPELVNQDPYGEGWIFRLKPRDMGDLDELLDAGGYQEVLESE 127
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_SHELP (Glycine cleavage system H protein OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=gcvH PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.682e-30 Identity = 64/128 (50.00%), Postives = 89/128 (69.53%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGSVA-TVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 S++ LKYASSHEW++ E + TVGI++HAQ+ LG++VFVELPE G SV G V ESVKA SD+ +P+SGEV+ VN L ++P LVNS Y +GW ++ PS S+L++L+D + Y +EE Sbjct: 2 SNIPTELKYASSHEWIRREEDGSYTVGISEHAQELLGDMVFVELPEVGDSVSAGDDCAVAESVKAASDIYAPVSGEVVAVNEALEDSPELVNSDAYGDGWFFRIMPSDLSELDNLLDAEGYQAVIDEE 129
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_SHEDO (Glycine cleavage system H protein OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=gcvH PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.682e-30 Identity = 64/127 (50.39%), Postives = 89/127 (70.08%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGSVA-TVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 S++ LK+ASSHEWV+ E + TVGIT+HAQ+ LG++VFVELPE G SV G V ESVKA SD+ +PISGEV+ VN+ L ++P LVNS Y +GW ++ PS S++++L+D + Y +E Sbjct: 2 STIPTDLKFASSHEWVRKEDDGSYTVGITEHAQELLGDMVFVELPEVGDSVSAGAECAVAESVKAASDIYAPISGEVVAVNSSLEDSPELVNSDAYGDGWFFRIMPSDESEVDALLDAEGYQDVIDE 128
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_BACHD (Glycine cleavage system H protein OS=Bacillus halodurans GN=gcvH PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.682e-30 Identity = 63/127 (49.61%), Postives = 84/127 (66.14%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 S++ + LKY+ HEWVK EG +GITD AQ LG++VFVELPE G V+ FG VESVK S++ +P+SG+V+EVN +L + P VN SPYE+ W+I V+PS S +E LM Y + EE Sbjct: 2 SNLPNELKYSEEHEWVKVEGDKVRIGITDFAQSELGDIVFVELPEVGDEVEADEPFGSVESVKTVSELYAPVSGKVVEVNEELDDNPEYVNESPYEKAWMIVVEPSDASQVEELMSADEYKEMISEE 128
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_VIBCM (Glycine cleavage system H protein OS=Vibrio cholerae serotype O1 (strain M66-2) GN=gcvH PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.809e-30 Identity = 61/122 (50.00%), Postives = 83/122 (68.03%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 LK+ SHEWV+ G T+GI++HAQ+ LG+VVFVELPE A + G F +VESVKA SD+ +P++G VIEVN L +P L+N PY+ GW++KVK S P +L+ L D + Y EE+ Sbjct: 5 LKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPEIDAEIDAGDSFSLVESVKAASDIYAPVTGVVIEVNEDLQNSPELINEEPYDGGWIVKVKMSDPDELKDLKDAEEYLASIEED 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_VIBCH (Glycine cleavage system H protein OS=Vibrio cholerae GN=gcvH PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.809e-30 Identity = 61/122 (50.00%), Postives = 83/122 (68.03%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 LK+ SHEWV+ G T+GI++HAQ+ LG+VVFVELPE A + G F +VESVKA SD+ +P++G VIEVN L +P L+N PY+ GW++KVK S P +L+ L D + Y EE+ Sbjct: 5 LKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPEIDAEIDAGDSFSLVESVKAASDIYAPVTGVVIEVNEDLQNSPELINEEPYDGGWIVKVKMSDPDELKDLKDAEEYLASIEED 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_VIBC3 (Glycine cleavage system H protein OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=gcvH PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.809e-30 Identity = 61/122 (50.00%), Postives = 83/122 (68.03%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 LK+ SHEWV+ G T+GI++HAQ+ LG+VVFVELPE A + G F +VESVKA SD+ +P++G VIEVN L +P L+N PY+ GW++KVK S P +L+ L D + Y EE+ Sbjct: 5 LKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPEIDAEIDAGDSFSLVESVKAASDIYAPVTGVVIEVNEDLQNSPELINEEPYDGGWIVKVKMSDPDELKDLKDAEEYLASIEED 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_SODGM (Glycine cleavage system H protein OS=Sodalis glossinidius (strain morsitans) GN=gcvH PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.809e-30 Identity = 65/129 (50.39%), Postives = 89/129 (68.99%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEEN 513 S+V LKY +SHEWV +EG V VGIT+HAQ+ LG++VF++LPE GA+ G V ESVKA SD+ +PISGE++ VN L +P LVNS+PY +GWL K+K + S++ L+D AY +EE+ Sbjct: 2 SNVPTELKYTASHEWVLNEGDGVYCVGITEHAQELLGDMVFMDLPEVGATFSAGEDCAVAESVKAASDIYAPISGEIVAVNDDLEASPELVNSAPYTDGWLFKIKATDDSEVNELLDAAAYQAAIDEED 130
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_SHEFN (Glycine cleavage system H protein OS=Shewanella frigidimarina (strain NCIMB 400) GN=gcvH PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.809e-30 Identity = 65/128 (50.78%), Postives = 89/128 (69.53%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGSVA-TVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 S++ LKYASSHEW++ E + TVGIT+HAQ+ LG++VFVELPE G +V G V ESVKA SD+ +PISGEVI VN L ++P LVNS + +GW +V PS S++++L+D Y + +EE Sbjct: 2 STIPADLKYASSHEWIRKESDGSYTVGITEHAQELLGDMVFVELPEVGDTVTAGEDCAVAESVKAASDIYAPISGEVIAVNESLEDSPELVNSDAFGDGWFFRVMPSDESEVDALLDADGYQEVIDEE 129 The following BLAST results are available for this feature:
BLAST of CX299943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299943 ID=CX299943; Name=CX299943; organism=Citrus clementina; type=EST; length=610bpback to top |