CX299943
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_VIBVY (Glycine cleavage system H protein OS=Vibrio vulnificus (strain YJ016) GN=gcvH PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.766e-32 Identity = 63/122 (51.64%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 LK+ SHEWV+ G T+GI++HAQ+ LG+VVFVELPE A ++ G F +VESVKA SD+ +P++GEV+EVN +L+++P L+N PYE GW++KVK S PS+L++L D + Y EE+ Sbjct: 5 LKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPELEAEIEAGESFSLVESVKAASDIYAPVTGEVVEVNEELSDSPELINEEPYEGGWIVKVKLSDPSELDNLKDAEEYLNSIEED 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_VIBVU (Glycine cleavage system H protein OS=Vibrio vulnificus GN=gcvH PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.766e-32 Identity = 63/122 (51.64%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 LK+ SHEWV+ G T+GI++HAQ+ LG+VVFVELPE A ++ G F +VESVKA SD+ +P++GEV+EVN +L+++P L+N PYE GW++KVK S PS+L++L D + Y EE+ Sbjct: 5 LKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPELEAEIEAGESFSLVESVKAASDIYAPVTGEVVEVNEELSDSPELINEEPYEGGWIVKVKLSDPSELDNLKDAEEYLNSIEED 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_STAAB (Glycine cleavage system H protein OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=gcvH PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.306e-32 Identity = 64/125 (51.20%), Postives = 93/125 (74.40%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 +V + LKY++ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VESVK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S LE+L+ + Y++ E Sbjct: 2 AVPNELKYSNEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYSEMIGE 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_STAAR (Glycine cleavage system H protein OS=Staphylococcus aureus (strain MRSA252) GN=gcvH PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.012e-32 Identity = 64/125 (51.20%), Postives = 92/125 (73.60%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 +V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VESVK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S LE+L+ + Y++ E Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYSEMIGE 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_STAAN (Glycine cleavage system H protein OS=Staphylococcus aureus (strain N315) GN=gcvH PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.012e-32 Identity = 64/125 (51.20%), Postives = 92/125 (73.60%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 +V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VESVK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S LE+L+ + Y++ E Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYSEMIGE 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_STAAM (Glycine cleavage system H protein OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gcvH PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.012e-32 Identity = 64/125 (51.20%), Postives = 92/125 (73.60%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 +V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VESVK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S LE+L+ + Y++ E Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYSEMIGE 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_STAA9 (Glycine cleavage system H protein OS=Staphylococcus aureus (strain JH9) GN=gcvH PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.012e-32 Identity = 64/125 (51.20%), Postives = 92/125 (73.60%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 +V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VESVK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S LE+L+ + Y++ E Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYSEMIGE 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_STAA2 (Glycine cleavage system H protein OS=Staphylococcus aureus (strain JH1) GN=gcvH PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.012e-32 Identity = 64/125 (51.20%), Postives = 92/125 (73.60%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 +V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VESVK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S LE+L+ + Y++ E Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYSEMIGE 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_STAA1 (Glycine cleavage system H protein OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=gcvH PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.012e-32 Identity = 64/125 (51.20%), Postives = 92/125 (73.60%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 +V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VESVK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S LE+L+ + Y++ E Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYSEMIGE 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_VIBHB (Glycine cleavage system H protein OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=gcvH PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.934e-32 Identity = 64/122 (52.46%), Postives = 88/122 (72.13%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 LK+ SHEWV+ G AT+GI++HAQ+ LG+VVFV+LP+ V+ G F +VESVKA SD+ SPI+GEV+E+N +L ++P L+N PYE GW++KVK S PS+L+ L D + Y EEE Sbjct: 5 LKFTDSHEWVRDNGDGTATIGISEHAQEMLGDVVFVDLPDVEDEVEAGESFSLVESVKAASDIYSPITGEVVEINEELEDSPELINEEPYEGGWIVKVKLSDPSELDDLKDAEEYLSSIEEE 126 The following BLAST results are available for this feature:
BLAST of CX299943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299943 ID=CX299943; Name=CX299943; organism=Citrus clementina; type=EST; length=610bpback to top |