CX299943
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_THEMA (Glycine cleavage system H protein OS=Thermotoga maritima GN=gcvH PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.934e-32 Identity = 64/120 (53.33%), Postives = 85/120 (70.83%), Query Frame = 1 Query: 151 KYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 KY +HEWV E VATVGIT+HAQ+ LG+VV+V+LPE G VK+G +ESVKA +DV +P+SG+++EVN KL P L+N P EGWL K++ S +LE L+D QAY +FC +E Sbjct: 5 KYTKTHEWVSIEDKVATVGITNHAQEQLGDVVYVDLPEVGREVKKGEVVASIESVKAAADVYAPLSGKIVEVNEKLDTEPELINKDPEGEGWLFKMEISDEGELEDLLDEQAYQEFCAQE 124
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_ECO7I (Glycine cleavage system H protein OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=gcvH PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.934e-32 Identity = 67/128 (52.34%), Postives = 90/128 (70.31%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 S+V LKY+ HEW++ E TVGIT+HAQ+ LG++VFV+LPE GA+V G V ESVKA SD+ +P+SGE++EVN L+++P LVNS PY GW+ K+K S S+LESL+D AY E+E Sbjct: 2 SNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVEVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_STAAW (Glycine cleavage system H protein OS=Staphylococcus aureus (strain MW2) GN=gcvH PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.138e-32 Identity = 63/125 (50.40%), Postives = 92/125 (73.60%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 +V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VESVK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S +E+L+ + Y++ E Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYSEMIGE 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_STAAS (Glycine cleavage system H protein OS=Staphylococcus aureus (strain MSSA476) GN=gcvH PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.138e-32 Identity = 63/125 (50.40%), Postives = 92/125 (73.60%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 +V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VESVK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S +E+L+ + Y++ E Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYSEMIGE 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_SHEAM (Glycine cleavage system H protein OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=gcvH PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.138e-32 Identity = 68/128 (53.12%), Postives = 89/128 (69.53%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWV-KHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 S++ LKYASSHEW+ K + TVGIT+HAQ+ LG++VFVELPE G +V G V ESVKA SD+ +PISGEVI VN L ++P LVNS Y +GW ++KPS S+L+SL+D + Y +EE Sbjct: 2 SNIPSELKYASSHEWIRKEDDGTYTVGITEHAQELLGDMVFVELPEVGDTVSAGEDCAVAESVKAASDIYAPISGEVIAVNESLEDSPELVNSDAYGDGWFFRIKPSDESELDSLLDAEGYQAVIDEE 129
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_SALAR (Glycine cleavage system H protein OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=gcvH PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.138e-32 Identity = 66/128 (51.56%), Postives = 91/128 (71.09%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 S+V LKY+ HEW++ E TVGIT+HAQ+ LG++VFV+LPE GA+V G V ESVKA SD+ +P+SGE++ VN L+++P LVNS PY +GW+ K+K S+ S+LESL+D AY E+E Sbjct: 2 SNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYADGWIFKIKASNESELESLLDATAYEALLEDE 129
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_CHRSD (Glycine cleavage system H protein OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=gcvH PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.138e-32 Identity = 68/128 (53.12%), Postives = 85/128 (66.41%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 S + L+Y SHEWV G T+GITDHAQ+ LG+VVFVELPETG + G FGV+ESVKA SD+ P+SGE+I VN L + P VN +PYE+GW+IK+K + P LESL+D AY E Sbjct: 2 SHIPANLRYTDSHEWVLDNGDGTVTIGITDHAQEALGDVVFVELPETGRELDAGEEFGVIESVKAASDLYLPLSGEIIAVNESLEDAPETVNDNPYEDGWIIKLKLAEPEALESLLDATAYDALVSAE 129
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_PECCP (Glycine cleavage system H protein OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=gcvH PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 6.710e-32 Identity = 66/128 (51.56%), Postives = 90/128 (70.31%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 S+V LKY +SHEWV HEG + +VGIT+HAQ+ LG++VF++LPE G V G V ESVKA SD+ +PISGE++EVN L +P LVNS+PY +GWL +++ S SDL+ L+D + Y EE+ Sbjct: 2 SNVPAELKYTTSHEWVLHEGGGIYSVGITEHAQELLGDMVFIDLPEVGTVVAAGDDCAVAESVKAASDIYAPISGEIVEVNDDLESSPELVNSAPYADGWLFRIRISDESDLDELLDAEGYQASLEED 129
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_YERPY (Glycine cleavage system H protein OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=gcvH PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.764e-32 Identity = 67/127 (52.76%), Postives = 91/127 (71.65%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 S+V LKYA SHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V ESVKA SD+ +PISGE++ VNT+L +P LVNS+PY +GWL +K + S+L++L+D AY EE Sbjct: 2 SNVPTELKYALSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSDVSAGSDCAVAESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDADAYLAAIEE 128
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_YERPS (Glycine cleavage system H protein OS=Yersinia pseudotuberculosis GN=gcvH PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.764e-32 Identity = 67/127 (52.76%), Postives = 91/127 (71.65%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 S+V LKYA SHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V ESVKA SD+ +PISGE++ VNT+L +P LVNS+PY +GWL +K + S+L++L+D AY EE Sbjct: 2 SNVPTELKYALSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSDVSAGSDCAVAESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDADAYLAAIEE 128 The following BLAST results are available for this feature:
BLAST of CX299943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299943 ID=CX299943; Name=CX299943; organism=Citrus clementina; type=EST; length=610bpback to top |