CX299943
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_YERPP (Glycine cleavage system H protein OS=Yersinia pestis (strain Pestoides F) GN=gcvH PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.764e-32 Identity = 67/127 (52.76%), Postives = 91/127 (71.65%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 S+V LKYA SHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V ESVKA SD+ +PISGE++ VNT+L +P LVNS+PY +GWL +K + S+L++L+D AY EE Sbjct: 2 SNVPTELKYALSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSDVSAGSDCAVAESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDADAYLAAIEE 128
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_YERPN (Glycine cleavage system H protein OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=gcvH PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.764e-32 Identity = 67/127 (52.76%), Postives = 91/127 (71.65%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 S+V LKYA SHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V ESVKA SD+ +PISGE++ VNT+L +P LVNS+PY +GWL +K + S+L++L+D AY EE Sbjct: 2 SNVPTELKYALSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSDVSAGSDCAVAESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDADAYLAAIEE 128
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_YERPG (Glycine cleavage system H protein OS=Yersinia pestis bv. Antiqua (strain Angola) GN=gcvH PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.764e-32 Identity = 67/127 (52.76%), Postives = 91/127 (71.65%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 S+V LKYA SHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V ESVKA SD+ +PISGE++ VNT+L +P LVNS+PY +GWL +K + S+L++L+D AY EE Sbjct: 2 SNVPTELKYALSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSDVSAGSDCAVAESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDADAYLAAIEE 128
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_YERPE (Glycine cleavage system H protein OS=Yersinia pestis GN=gcvH PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.764e-32 Identity = 67/127 (52.76%), Postives = 91/127 (71.65%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 S+V LKYA SHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V ESVKA SD+ +PISGE++ VNT+L +P LVNS+PY +GWL +K + S+L++L+D AY EE Sbjct: 2 SNVPTELKYALSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSDVSAGSDCAVAESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDADAYLAAIEE 128
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_YERPB (Glycine cleavage system H protein OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=gcvH PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.764e-32 Identity = 67/127 (52.76%), Postives = 91/127 (71.65%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 S+V LKYA SHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V ESVKA SD+ +PISGE++ VNT+L +P LVNS+PY +GWL +K + S+L++L+D AY EE Sbjct: 2 SNVPTELKYALSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSDVSAGSDCAVAESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDADAYLAAIEE 128
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_YERPA (Glycine cleavage system H protein OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=gcvH PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.764e-32 Identity = 67/127 (52.76%), Postives = 91/127 (71.65%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 S+V LKYA SHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V ESVKA SD+ +PISGE++ VNT+L +P LVNS+PY +GWL +K + S+L++L+D AY EE Sbjct: 2 SNVPTELKYALSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSDVSAGSDCAVAESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDADAYLAAIEE 128
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_YERP3 (Glycine cleavage system H protein OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=gcvH PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.764e-32 Identity = 67/127 (52.76%), Postives = 91/127 (71.65%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 S+V LKYA SHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V ESVKA SD+ +PISGE++ VNT+L +P LVNS+PY +GWL +K + S+L++L+D AY EE Sbjct: 2 SNVPTELKYALSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSDVSAGSDCAVAESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDADAYLAAIEE 128
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_ALCBS (Glycine cleavage system H protein OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=gcvH PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.764e-32 Identity = 66/121 (54.55%), Postives = 85/121 (70.25%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 L+YASSHEW K E VATVGI+DHAQD +G++V+VELPE G V G GVVESVKA SD+ SP+SGE++E+N L + P LVN+ PYE GWL KV+ + +L+SL+ Y + E Sbjct: 8 LRYASSHEWAKVEDGVATVGISDHAQDAMGDLVYVELPEVGQVVAAGDETGVVESVKAASDIYSPVSGEIVEINEALEDEPELVNNVPYEGGWLFKVQLTDEGELDSLLTADQYQAQIDSE 128
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_VIBPA (Glycine cleavage system H protein OS=Vibrio parahaemolyticus GN=gcvH PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.495e-31 Identity = 62/122 (50.82%), Postives = 87/122 (71.31%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 LK+ SHEWV+ G T+GI++HAQ+ LG+VVFV+LP+ V+ G F +VESVKA SD+ SP++GEV+E+N +L ++P L+N PYE GW++KVK S PS+L+ L D + Y EEE Sbjct: 5 LKFTDSHEWVRDNGDGTVTIGISEHAQEMLGDVVFVDLPDVEDEVEAGESFSLVESVKAASDIYSPVTGEVVEINEELEDSPELINEEPYEGGWIVKVKLSDPSELDDLKDAEEYLSSIEEE 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_VIBSL (Glycine cleavage system H protein OS=Vibrio splendidus (strain LGP32) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.952e-31 Identity = 62/122 (50.82%), Postives = 88/122 (72.13%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 LK+A SHEWVK G T+GI++HAQ+ LG+VVFV+LP+T ++ G F +VESVKA SD+ +PISGE++E+N +L ++P L+N PYE GW++KVK S S+L +L D + Y EE+ Sbjct: 5 LKFADSHEWVKDNGDGTVTIGISEHAQELLGDVVFVDLPDTEDEIEAGESFSLVESVKAASDIYAPISGEIVEINEELEDSPELINEEPYEGGWIVKVKMSDASELNNLKDAEEYLSSVEED 126 The following BLAST results are available for this feature:
BLAST of CX299943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299943 ID=CX299943; Name=CX299943; organism=Citrus clementina; type=EST; length=610bpback to top |