CX299943
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_CHLPB (Glycine cleavage system H protein OS=Chlorobium phaeobacteroides (strain BS1) GN=gcvH PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.295e-22 Identity = 55/120 (45.83%), Postives = 76/120 (63.33%), Query Frame = 1 Query: 142 DGLKYASSHEWVK--HEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTK 495 D L+Y S HEWVK +G V VGITD AQ LG++VFVE G +KQ FG VE+VK +D+ +P++G++ VN L + +VNSSPY+EGW+I++ P + +LM Q Y K Sbjct: 5 DDLRYTSDHEWVKVLDDGKVR-VGITDFAQSELGDIVFVETKPVGTVLKQQDIFGTVEAVKTVADLFAPVTGKINAVNDAL-DAAEIVNSSPYDEGWMIEIIVDDPEQVNALMTVQEYKK 122
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_CLAMS (Glycine cleavage system H protein OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=gcvH PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.222e-22 Identity = 49/98 (50.00%), Postives = 65/98 (66.33%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVK 441 L+Y + HEWV +G VATVGIT +A D LG+VVFVELP G + G G +ES K+ ++ +PI G V EVN + +P LVNS P+ GWL+KV+ Sbjct: 7 LQYTAEHEWVLIDGDVATVGITSYAADKLGDVVFVELPAVGDELAGGSVVGEIESTKSVGELFAPIDGTVTEVNDDVVASPDLVNSDPFGAGWLVKVR 104
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_STRGG (Glycine cleavage system H protein OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=gcvH PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.074e-21 Identity = 52/117 (44.44%), Postives = 77/117 (65.81%), Query Frame = 1 Query: 148 LKYASSHEWVKH-EGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVK-PSSPSDLESLMDPQAYT 492 L+Y+ HEW+ E VAT+GIT++A + LG+VV+ +LPE G +V G G +ES K+ SD+ SP++GEV N + + P LVNS+P+E GWL KV+ P+DL S + A++ Sbjct: 7 LRYSKEHEWLSALEDGVATIGITEYAANALGDVVYAQLPEVGDTVTAGETCGELESTKSVSDLYSPVTGEVTAANQDVVDDPSLVNSAPFEGGWLFKVRVAEEPADLLSADEYTAFS 123
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_MYCSS (Glycine cleavage system H protein OS=Mycobacterium sp. (strain MCS) GN=gcvH PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.074e-21 Identity = 55/119 (46.22%), Postives = 74/119 (62.18%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLES----LMDPQAY 489 L Y HEWV G VGITD+AQ LG+VVFV+LP+ GA + G FG VES K+ SD+ +P+S +V+ VN L +P LVNS PY EGWL+ ++ + D+E+ L+D Y Sbjct: 8 LYYTDEHEWVLRTGDDTLRVGITDYAQAALGDVVFVQLPDVGAELTSGESFGEVESTKSVSDLYAPVSAKVLAVNGNLEASPDLVNSDPYGEGWLVDLQLDA-DDMEAALGGLLDADGY 125
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_MYCSK (Glycine cleavage system H protein OS=Mycobacterium sp. (strain KMS) GN=gcvH PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.074e-21 Identity = 55/119 (46.22%), Postives = 74/119 (62.18%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLES----LMDPQAY 489 L Y HEWV G VGITD+AQ LG+VVFV+LP+ GA + G FG VES K+ SD+ +P+S +V+ VN L +P LVNS PY EGWL+ ++ + D+E+ L+D Y Sbjct: 8 LYYTDEHEWVLRTGDDTLRVGITDYAQAALGDVVFVQLPDVGAELTSGESFGEVESTKSVSDLYAPVSAKVLAVNGNLEASPDLVNSDPYGEGWLVDLQLDA-DDMEAALGGLLDADGY 125
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_MYCSJ (Glycine cleavage system H protein OS=Mycobacterium sp. (strain JLS) GN=gcvH PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.074e-21 Identity = 55/119 (46.22%), Postives = 74/119 (62.18%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLES----LMDPQAY 489 L Y HEWV G VGITD+AQ LG+VVFV+LP+ GA + G FG VES K+ SD+ +P+S +V+ VN L +P LVNS PY EGWL+ ++ + D+E+ L+D Y Sbjct: 8 LYYTDEHEWVLRTGDDTLRVGITDYAQAALGDVVFVQLPDVGAELTSGESFGEVESTKSVSDLYAPVSAKVLAVNGNLEASPDLVNSDPYGEGWLVDLQLDA-DDMEAALGGLLDADGY 125
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_CLAM3 (Glycine cleavage system H protein OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=gcvH PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.074e-21 Identity = 49/98 (50.00%), Postives = 66/98 (67.35%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVK 441 L+Y + HEWV+ +G VATVGIT +A D LG+VVFVELP G + G G +ES K+ ++ +PI G V EVN + +P LVNS P+ GWL+KV+ Sbjct: 7 LQYTAEHEWVQVDGDVATVGITAYAADKLGDVVFVELPAVGDELAGGEVVGEIESTKSVGELFAPIDGTVTEVNDDVVASPDLVNSDPFGAGWLVKVR 104
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_PROMP (Glycine cleavage system H protein OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=gcvH PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.402e-21 Identity = 48/114 (42.11%), Postives = 74/114 (64.91%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAY 489 L+YA +HE+VK E + +G+++ A D LG++VFVEL E G ++++G FG +ESVKA +V P SGEVI VN + + P ++ + P +GWL+ +K S L+ LM+ Y Sbjct: 9 LRYADTHEYVKEENGLFKIGVSEFAIDQLGDIVFVELVEKGTNLQKGETFGTIESVKAVEEVYLPFSGEVISVNEGVIDNPEILQNDPIGDGWLLIIKSESNVLLDELMNSDEY 122
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_CLOPH (Glycine cleavage system H protein OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=gcvH PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.402e-21 Identity = 53/126 (42.06%), Postives = 78/126 (61.90%), Query Frame = 1 Query: 136 VLDGLKYASSHEWVKHEG-SVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 VL+ L Y +HEWV+ E + A VG+TD+AQ LG++VFV LP+ G G F VESVKA SDV P++G V E+N +L + P +N +PY E W K+ + ++ E + P+ Y +F ++E Sbjct: 3 VLENLVYTKTHEWVRFEDETTALVGLTDYAQQTLGQLVFVNLPQEGDETVTGESFADVESVKAVSDVYCPVTGVVSEINEELLDAPEKINDTPY-EAWFAKI--TDITEKEEFLSPEEYEEFVKKE 125
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_PICTO (Probable glycine cleavage system H protein OS=Picrophilus torridus GN=gcvH PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.832e-21 Identity = 54/126 (42.86%), Postives = 75/126 (59.52%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 S V D L Y SHEW E VATVGITD+AQ L ++V+V+ P+ G +G +ESVK+ DV SP++GE+IE+N L P L+N PY + WL+K++ S +D M + Y K+ E Sbjct: 2 SRVPDNLYYTKSHEWFLIENGVATVGITDYAQHQLTDIVYVDFPKNGEHKNKGETLLTIESVKSAEDVYSPVTGEIIEINRDLESKPELINEDPY-KNWLVKIRLS--NDNFDGMSGEEYKKYIGE 124 The following BLAST results are available for this feature:
BLAST of CX299943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299943 ID=CX299943; Name=CX299943; organism=Citrus clementina; type=EST; length=610bpback to top |