CX299943
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH2_SULAC (Probable glycine cleavage system H protein 2 OS=Sulfolobus acidocaldarius GN=gcvH2 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.150e-15 Identity = 40/105 (38.10%), Postives = 68/105 (64.76%), Query Frame = 1 Query: 172 WVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQ 483 WVK EGS +A VGITD AQ G++V + + + G V++G +ES K V +P+SGEV++ N+++ ++P ++N PY +GW+ K+K S+ +++ L+ Q Sbjct: 24 WVKIEGSDIAVVGITDLAQTMAGKIVKIRIKKKGIKVERGRPVATLESGKWAGPVPAPVSGEVVDSNSEVEKSPVILNRDPYGQGWIAKIKISNQEEVKQLLTGQ 128
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH5_AQUAE (Glycine cleavage system H protein 5 OS=Aquifex aeolicus GN=gcvH5 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.346e-15 Identity = 39/101 (38.61%), Postives = 56/101 (55.45%), Query Frame = 1 Query: 172 WVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLM 474 W K E V T+G+T A G +V + G +VK+ +ES K V SP GE++EVN L P LVN PY +GW+ KVKP++P + +S++ Sbjct: 26 WAKEEDGVFTIGLTSVAAAMAGRLVAYTPKKVGKAVKKDKSVATIESGKWVGPVPSPFDGEIVEVNEALKGNPALVNDDPYGQGWIAKVKPANPEEAKSVL 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_CHLMU (Glycine cleavage system H protein OS=Chlamydia muridarum GN=gcvH PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.370e-15 Identity = 44/117 (37.61%), Postives = 68/117 (58.12%), Query Frame = 1 Query: 139 LDGLKYASS-HEWVKH-EGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESL-MDP 480 + G KY S H W++ + +G++ Q+HLG ++ ++LP GAS+K+G V+ES K+ +V SP+SGEVIEVN L + +N S EGW + ++ S D E +DP Sbjct: 1 MKGKKYYSDYHVWIEPIHSQIVRLGLSSRMQEHLGNILHIDLPSLGASIKEGEELCVLESSKSAIEVLSPVSGEVIEVNIALEDDTHPINHSAESEGWFVVLQLSEDFDGERFSLDP 117
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH3_AQUAE (Glycine cleavage system H protein 3 OS=Aquifex aeolicus GN=gcvH3 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.661e-14 Identity = 38/118 (32.20%), Postives = 63/118 (53.39%), Query Frame = 1 Query: 172 WVK-HEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAAH 522 WV+ +E T+G+TD Q G ++ + + G VK+G +ES K V + + GE++EVN K+ E P +N PY + W++K+KP+S L+ + A+ + EE H Sbjct: 32 WVRVNEDGTVTLGLTDVGQTRAGRLLHIRVKPVGTKVKKGKPVATLESGKWAGPVPALVEGEIVEVNPKVVEDPNYINIDPYGDAWIVKIKPTSEETLKRDLSELAHGEKAHEEMKKH 149
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_CHLPN (Glycine cleavage system H protein OS=Chlamydia pneumoniae GN=gcvH PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.169e-14 Identity = 45/115 (39.13%), Postives = 69/115 (60.00%), Query Frame = 1 Query: 154 YASSHEWVK--HEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPS---SPSDLESLMDPQ 483 Y+ H W+ HE V +G+T+ Q +LG ++ V+LP G+ K+G ++ES K+ +V SP+SGEVI++N L + P +N +P EGWL V+ PS+L SLMD + Sbjct: 3 YSDYHVWILPVHE-RVVRLGLTEKMQKNLGAILHVDLPSVGSLCKEGEVLVILESSKSAIEVLSPVSGEVIDINLDLVDNPQKINEAPEGEGWLAVVRLDQDWDPSNL-SLMDEE 115
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH2_AQUAE (Glycine cleavage system H protein 2 OS=Aquifex aeolicus GN=gcvH2 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.398e-13 Identity = 40/103 (38.83%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 172 WVK-HEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSS-PSDLESLM 474 W K +E TVG+TD Q G+++ + + G VK+G +ES K V + I GEV+E N KL + P L+N PY EGW+ K+KP++ DL+ L+ Sbjct: 26 WFKVNEDGTVTVGVTDIGQARAGKIINIRIKPPGKYVKKGKPVASLESGKWAGPVPADIEGEVVERNEKLFDKPDLINEDPYGEGWIAKLKPANLERDLQDLV 128
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_CHLTR (Glycine cleavage system H protein OS=Chlamydia trachomatis GN=gcvH PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.976e-13 Identity = 37/100 (37.00%), Postives = 62/100 (62.00%), Query Frame = 1 Query: 139 LDGLKYASS-HEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLI 432 + G KY S H W++ S + +G++ ++HLG ++ ++LP GA +K+G ++ES K+ +V SP+SGEV+EVNT L + VN++ EGW + Sbjct: 1 MKGKKYYSDYHVWIEPIHSRIVKLGLSSQMREHLGNILHIDLPSLGAFIKEGEKLCILESSKSAIEVLSPVSGEVLEVNTALEDDILPVNNATESEGWFV 100
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_CHLTA (Glycine cleavage system H protein OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=gcvH PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.976e-13 Identity = 37/100 (37.00%), Postives = 62/100 (62.00%), Query Frame = 1 Query: 139 LDGLKYASS-HEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLI 432 + G KY S H W++ S + +G++ ++HLG ++ ++LP GA +K+G ++ES K+ +V SP+SGEV+EVNT L + VN++ EGW + Sbjct: 1 MKGKKYYSDYHVWIEPIHSRIVKLGLSSQMREHLGNILHIDLPSLGAFIKEGEKLCILESSKSAIEVLSPVSGEVLEVNTALEDDILPVNNATESEGWFV 100
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_CHLTB (Glycine cleavage system H protein OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=gcvH PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.190e-12 Identity = 36/100 (36.00%), Postives = 62/100 (62.00%), Query Frame = 1 Query: 139 LDGLKYASS-HEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLI 432 + G KY S H W++ S + +G++ ++HLG ++ ++LP G+ +K+G ++ES K+ +V SP+SGEV+EVNT L + VN++ EGW + Sbjct: 1 MKGQKYYSDYHVWIEPIHSRIVKLGLSSQMREHLGNILHIDLPSVGSFIKEGEELCILESSKSAIEVLSPVSGEVLEVNTALEDDILPVNNATESEGWFV 100
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_CHLT2 (Glycine cleavage system H protein OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=gcvH PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.190e-12 Identity = 36/100 (36.00%), Postives = 62/100 (62.00%), Query Frame = 1 Query: 139 LDGLKYASS-HEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLI 432 + G KY S H W++ S + +G++ ++HLG ++ ++LP G+ +K+G ++ES K+ +V SP+SGEV+EVNT L + VN++ EGW + Sbjct: 1 MKGQKYYSDYHVWIEPIHSRIVKLGLSSQMREHLGNILHIDLPSVGSFIKEGEELCILESSKSAIEVLSPVSGEVLEVNTALEDDILPVNNATESEGWFV 100 The following BLAST results are available for this feature:
BLAST of CX299943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299943 ID=CX299943; Name=CX299943; organism=Citrus clementina; type=EST; length=610bpback to top |