CX299943
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_ECO5E (Glycine cleavage system H protein OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.952e-31 Identity = 66/128 (51.56%), Postives = 89/128 (69.53%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 S+V LKY+ HEW++ E TVGIT+HAQ+ LG++VFV+LPE GA+V G V ESVKA SD+ +P+SGE++ VN L+++P LVNS PY GW+ K+K S S+LESL+D AY E+E Sbjct: 2 SNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_ECO57 (Glycine cleavage system H protein OS=Escherichia coli O157:H7 GN=gcvH PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 1.952e-31 Identity = 66/128 (51.56%), Postives = 89/128 (69.53%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 S+V LKY+ HEW++ E TVGIT+HAQ+ LG++VFV+LPE GA+V G V ESVKA SD+ +P+SGE++ VN L+++P LVNS PY GW+ K+K S S+LESL+D AY E+E Sbjct: 2 SNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_ECO55 (Glycine cleavage system H protein OS=Escherichia coli (strain 55989 / EAEC) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.952e-31 Identity = 66/128 (51.56%), Postives = 89/128 (69.53%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 S+V LKY+ HEW++ E TVGIT+HAQ+ LG++VFV+LPE GA+V G V ESVKA SD+ +P+SGE++ VN L+++P LVNS PY GW+ K+K S S+LESL+D AY E+E Sbjct: 2 SNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_ECO27 (Glycine cleavage system H protein OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.952e-31 Identity = 66/128 (51.56%), Postives = 89/128 (69.53%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEG-SVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 S+V LKY+ HEW++ E TVGIT+HAQ+ LG++VFV+LPE GA+V G V ESVKA SD+ +P+SGE++ VN L+++P LVNS PY GW+ K+K S S+LESL+D AY E+E Sbjct: 2 SNVPAELKYSKEHEWLRKEAYGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_ECO24 (Glycine cleavage system H protein OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.952e-31 Identity = 66/128 (51.56%), Postives = 89/128 (69.53%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 510 S+V LKY+ HEW++ E TVGIT+HAQ+ LG++VFV+LPE GA+V G V ESVKA SD+ +P+SGE++ VN L+++P LVNS PY GW+ K+K S S+LESL+D AY E+E Sbjct: 2 SNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYETLLEDE 129
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_STAAT (Glycine cleavage system H protein OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.550e-31 Identity = 62/125 (49.60%), Postives = 91/125 (72.80%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 +V + LKY+ HEWVK EG+VA +GIT++AQ LG++VFVELPET + +G FG VESVK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S +E+L+ + Y++ E Sbjct: 2 AVPNELKYSKEHEWVKVEGNVAIIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYSEMIGE 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_STAAE (Glycine cleavage system H protein OS=Staphylococcus aureus (strain Newman) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.550e-31 Identity = 62/125 (49.60%), Postives = 91/125 (72.80%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 +V + LKY+ HEWVK EG+VA +GIT++AQ LG++VFVELPET + +G FG VESVK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S +E+L+ + Y++ E Sbjct: 2 AVPNELKYSKEHEWVKVEGNVAIIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYSEMIGE 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_STAAC (Glycine cleavage system H protein OS=Staphylococcus aureus (strain COL) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.550e-31 Identity = 62/125 (49.60%), Postives = 91/125 (72.80%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 +V + LKY+ HEWVK EG+VA +GIT++AQ LG++VFVELPET + +G FG VESVK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S +E+L+ + Y++ E Sbjct: 2 AVPNELKYSKEHEWVKVEGNVAIIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYSEMIGE 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_STAA8 (Glycine cleavage system H protein OS=Staphylococcus aureus (strain NCTC 8325) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.550e-31 Identity = 62/125 (49.60%), Postives = 91/125 (72.80%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 +V + LKY+ HEWVK EG+VA +GIT++AQ LG++VFVELPET + +G FG VESVK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S +E+L+ + Y++ E Sbjct: 2 AVPNELKYSKEHEWVKVEGNVAIIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYSEMIGE 126
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_STAA3 (Glycine cleavage system H protein OS=Staphylococcus aureus (strain USA300) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.550e-31 Identity = 62/125 (49.60%), Postives = 91/125 (72.80%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 507 +V + LKY+ HEWVK EG+VA +GIT++AQ LG++VFVELPET + +G FG VESVK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S +E+L+ + Y++ E Sbjct: 2 AVPNELKYSKEHEWVKVEGNVAIIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYSEMIGE 126 The following BLAST results are available for this feature:
BLAST of CX299943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299943 ID=CX299943; Name=CX299943; organism=Citrus clementina; type=EST; length=610bpback to top |