CX299948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_PINTH (50S ribosomal protein L2, chloroplastic OS=Pinus thunbergii GN=rpl2 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.701e-31 Identity = 66/82 (80.49%), Postives = 75/82 (91.46%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVA+LIAKE +SATL+LPSGEVRLIS+NCSAT+GQVGN+ AN +S G+AG+K WLGKR VRGV Sbjct: 143 HNIEITLGKGGQLARAAGAVAELIAKEDRSATLRLPSGEVRLISENCSATIGQVGNITANNRSFGKAGAKRWLGKRSEVRGV 224
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_PINKO (50S ribosomal protein L2, chloroplastic OS=Pinus koraiensis GN=rpl2 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.701e-31 Identity = 66/82 (80.49%), Postives = 75/82 (91.46%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVA+LIAKE +SATL+LPSGEVRLIS+NCSAT+GQVGN+ AN +S G+AG+K WLGKR VRGV Sbjct: 143 HNIEITLGKGGQLARAAGAVAELIAKEDRSATLRLPSGEVRLISENCSATIGQVGNITANNRSFGKAGAKRWLGKRSEVRGV 224
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_PICAB (50S ribosomal protein L2, chloroplastic OS=Picea abies GN=rpl2 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.701e-31 Identity = 66/82 (80.49%), Postives = 75/82 (91.46%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVA+LIAKE +SATL+LPSGEVRLIS+NCSAT+GQVGN+ AN +S G+AG+K WLGKR VRGV Sbjct: 142 HNIEITLGKGGQLARAAGAVAELIAKEDRSATLRLPSGEVRLISENCSATIGQVGNITANNRSFGKAGAKRWLGKRSEVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_ANTFO (50S ribosomal protein L2, chloroplastic OS=Anthoceros formosae GN=rpl2 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.208e-30 Identity = 63/82 (76.83%), Postives = 73/82 (89.02%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HN+EIT GKGGQLARAAGAVAK+IAKEG+ ATL+LPSGEVRLIS+ C AT+GQVGN AN +++G+AGSK WLGKRP VRGV Sbjct: 142 HNVEITPGKGGQLARAAGAVAKIIAKEGRLATLRLPSGEVRLISQKCLATIGQVGNSDANNRTIGKAGSKRWLGKRPKVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_ANGEV (50S ribosomal protein L2, chloroplastic OS=Angiopteris evecta GN=rpl2 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.219e-29 Identity = 63/82 (76.83%), Postives = 71/82 (86.59%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HN+EIT GKGGQLARAAGAVAKLIAKEG+ ATL+ PSGEVRLIS++C ATVGQ+GN N K+ G+AGSK WLGKRP VRGV Sbjct: 142 HNVEITPGKGGQLARAAGAVAKLIAKEGRLATLRSPSGEVRLISQDCLATVGQIGNADINNKNFGKAGSKRWLGKRPKVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_HUPLU (50S ribosomal protein L2, chloroplastic OS=Huperzia lucidula GN=rpl2 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.592e-29 Identity = 63/82 (76.83%), Postives = 71/82 (86.59%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HN+EIT G+GGQLARAAG AKLIAKEG+ AT +LPSGEVRLIS+NC ATVGQVGNV N ++LG+AGSK WLGKRP VRGV Sbjct: 143 HNVEITPGRGGQLARAAGTAAKLIAKEGRLATSRLPSGEVRLISQNCLATVGQVGNVDDNNRTLGKAGSKRWLGKRPKVRGV 224
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_PSINU (50S ribosomal protein L2, chloroplastic OS=Psilotum nudum GN=rpl2 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 2.079e-29 Identity = 61/82 (74.39%), Postives = 72/82 (87.80%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+T GKGGQL RAAG VAK++AKE K AT++LPSGE RLISKNC AT+GQVGN+ AN+ +LG+AGSK WLGKRP+VRGV Sbjct: 142 HNIELTPGKGGQLVRAAGTVAKIMAKEEKWATIRLPSGEFRLISKNCLATIGQVGNIDANKITLGKAGSKRWLGKRPIVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_ZYGCR (50S ribosomal protein L2, chloroplastic OS=Zygnema circumcarinatum GN=rpl2 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.716e-29 Identity = 60/82 (73.17%), Postives = 72/82 (87.80%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ GKGGQ+ARAAGA+AK+IAKEGK ATL+LPSGEVRL+ + C AT+GQVGNV AN +S+G+AGSK WLG+RP VRGV Sbjct: 142 HNIELQPGKGGQVARAAGAIAKIIAKEGKFATLRLPSGEVRLVLQQCLATIGQVGNVDANNQSIGKAGSKRWLGRRPTVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_WHEAT (50S ribosomal protein L2, chloroplastic OS=Triticum aestivum GN=rpl2-A PE=3 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 2.716e-29 Identity = 64/82 (78.05%), Postives = 70/82 (85.37%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HN E T G+GGQLARAAGAVAK AKEGK ATL+LPSGE R++++N ATVGQ G VG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNKENTRGRGGQLARAAGAVAKHKAKEGKMATLRLPSGEGRIVTQNSLATVGQEGKVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_PHYPA (50S ribosomal protein L2, chloroplastic OS=Physcomitrella patens GN=rpl2 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.547e-29 Identity = 61/82 (74.39%), Postives = 73/82 (89.02%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEIT GKGGQL ++AGAVAKLIAKEG+ ATL+LPSGEVRL+S+N AT+GQ+GNV AN K++G+AG+K WLGKRP VRGV Sbjct: 142 HNIEITPGKGGQLVKSAGAVAKLIAKEGQLATLRLPSGEVRLVSQNSLATIGQIGNVDANNKTIGKAGAKRWLGKRPRVRGV 223 The following BLAST results are available for this feature:
BLAST of CX299948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299948 ID=CX299948; Name=CX299948; organism=Citrus clementina; type=EST; length=249bpback to top |