CX299948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_PSEAK (50S ribosomal protein L2, chloroplastic OS=Pseudendoclonium akinetum GN=rpl2 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.923e-25 Identity = 52/82 (63.41%), Postives = 67/82 (81.71%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HN+E+ G GGQL+RAAG+ A+++AKEG+ TL+LPSGEVRL+S+NC AT+GQVGNV AN +G+AG WLG+RP VRGV Sbjct: 142 HNVELYSGMGGQLSRAAGSSAQIVAKEGRFVTLRLPSGEVRLVSQNCWATIGQVGNVDANNIRIGKAGRMRWLGRRPKVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_OLTVI (50S ribosomal protein L2, chloroplastic OS=Oltmannsiellopsis viridis GN=rpl2 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.041e-25 Identity = 55/82 (67.07%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HN+E+ G GGQLARAAGAVA+++AKEG TL+LPSGEVRL+S C ATVGQVGN A +G+AG K WLGKRP VRGV Sbjct: 142 HNVELQPGAGGQLARAAGAVAQIVAKEGNLVTLRLPSGEVRLVSNECWATVGQVGNTDAINMVVGKAGRKRWLGKRPHVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_LEPTE (50S ribosomal protein L2, chloroplastic OS=Leptosira terrestris GN=rpl2 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.041e-25 Identity = 53/82 (64.63%), Postives = 66/82 (80.49%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ G GGQLARAAG+VA+L+AKEG TL+LPSGE+RL+SK+C AT+GQVGNV ++G+AG WLG+RP VRGV Sbjct: 142 HNIELKPGSGGQLARAAGSVAQLVAKEGNFVTLRLPSGEIRLVSKSCWATIGQVGNVEQMNLTVGKAGKSRWLGRRPKVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_GLOVI (50S ribosomal protein L2 OS=Gloeobacter violaceus GN=rplB PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.542e-24 Identity = 54/82 (65.85%), Postives = 67/82 (81.71%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ G+GGQ+ARAAGAVA+L+AKEG ATL+LPSGEVR++ K C AT+GQVGN+ A S+G+AG + WLGKRP RGV Sbjct: 142 HNIELLPGRGGQMARAAGAVAQLMAKEGDYATLRLPSGEVRVVRKECYATLGQVGNLDAKNISIGKAGRQRWLGKRPHNRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_THEEB (50S ribosomal protein L2 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplB PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.014e-24 Identity = 53/81 (65.43%), Postives = 63/81 (77.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HN+EIT G+G Q+ RAAGA+A+++AKEG TLKLPSGEVRL K C AT+GQVGNV AN SLG+AG W G+RP VRG Sbjct: 143 HNVEITPGRGAQMVRAAGAMAQVVAKEGDMVTLKLPSGEVRLFRKECYATIGQVGNVEANNISLGKAGRNRWKGRRPKVRG 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_CYAP4 (50S ribosomal protein L2 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rplB PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.014e-24 Identity = 51/81 (62.96%), Postives = 63/81 (77.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HN+EIT G+GGQ+ RAAGA+A+++AKEG TLKLPSGEVRL K C AT+GQ+GNV N S+G+AG W G+RP VRG Sbjct: 142 HNVEITPGRGGQMVRAAGAMAQVVAKEGDMVTLKLPSGEVRLFRKECYATIGQIGNVDVNNISIGKAGRNRWKGRRPKVRG 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_ACAM1 (50S ribosomal protein L2 OS=Acaryochloris marina (strain MBIC 11017) GN=rplB PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.014e-24 Identity = 52/81 (64.20%), Postives = 64/81 (79.01%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HN+E+ GKGGQLARAAGA+A+++AKEGK TLKLPSGEVRL K C AT+GQVGNV +N ++G+AG W +RP VRG Sbjct: 142 HNVELIPGKGGQLARAAGALAQVVAKEGKMVTLKLPSGEVRLFQKECYATIGQVGNVESNNITIGKAGRNRWKARRPKVRG 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_CHAVU (50S ribosomal protein L2, chloroplastic OS=Chara vulgaris GN=rpl2 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.014e-24 Identity = 53/81 (65.43%), Postives = 65/81 (80.25%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HNIE+ GKGGQL RAAG VA+++AKEGK +++LPSGEVRLI + C AT+GQVGN N +S+G+AGSK W GKRP VRG Sbjct: 142 HNIELQPGKGGQLVRAAGTVAQVVAKEGKWTSIRLPSGEVRLIYQKCLATIGQVGNPEFNNQSIGKAGSKRWQGKRPKVRG 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_GEOSL (50S ribosomal protein L2 OS=Geobacter sulfurreducens GN=rplB PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.487e-24 Identity = 51/82 (62.20%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ +GKGGQLAR+AG A+L+AKEGK A +KLPSGEVR++ +C AT+GQVGN+ S+G+AG WLG+RP VRGV Sbjct: 142 HNIELKIGKGGQLARSAGTFAQLMAKEGKYAQVKLPSGEVRMVLLDCMATIGQVGNIDHENVSIGKAGRSRWLGRRPKVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_OSTTA (50S ribosomal protein L2, chloroplastic OS=Ostreococcus tauri GN=rpl2 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.860e-24 Identity = 54/81 (66.67%), Postives = 64/81 (79.01%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HNIE+ KGGQL R+AGAVA+L+AKEG+ TL+LPSGEVRLIS C AT+GQVGN+ A SLG+AG WLG+RP VRG Sbjct: 142 HNIEMHPKKGGQLVRSAGAVAQLVAKEGEYVTLRLPSGEVRLISNKCWATIGQVGNMEAMNLSLGKAGRSRWLGRRPTVRG 222 The following BLAST results are available for this feature:
BLAST of CX299948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299948 ID=CX299948; Name=CX299948; organism=Citrus clementina; type=EST; length=249bpback to top |