CX299948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_ADICA (50S ribosomal protein L2, chloroplastic OS=Adiantum capillus-veneris GN=rpl2 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 5.860e-24 Identity = 51/81 (62.96%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HNIE+ G+G QL R+AG VAK+IAKEG+ ATL+LPSGE+RL+ ++C A+VG+VGNV + K L +AGSK WLG+RP VRG Sbjct: 139 HNIELKSGRGAQLVRSAGTVAKVIAKEGRLATLRLPSGEIRLVPRDCLASVGRVGNVDISNKGLKKAGSKRWLGRRPKVRG 219
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_GEOMG (50S ribosomal protein L2 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=rplB PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.654e-24 Identity = 51/82 (62.20%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ +GKGGQLAR+AG A+L+AKEGK A +KLPSGEVR++ +C ATVGQVGN+ ++G+AG WLG+RP VRGV Sbjct: 142 HNIELKIGKGGQLARSAGTFAQLMAKEGKYAQVKLPSGEVRMVLLDCMATVGQVGNIDHENVTIGKAGRSRWLGRRPKVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_PELPD (50S ribosomal protein L2 OS=Pelobacter propionicus (strain DSM 2379) GN=rplB PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 9.996e-24 Identity = 51/82 (62.20%), Postives = 66/82 (80.49%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HN+E+ LGKG QLAR+AG A+L+AKEG+ + +KLPSGEVR++ ++C AT+GQVGNV + SLG+AG WLGKRP VRGV Sbjct: 142 HNVELKLGKGAQLARSAGTFAQLMAKEGRYSQVKLPSGEVRMVLQDCYATIGQVGNVDHEKVSLGKAGRARWLGKRPKVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_CHLVU (50S ribosomal protein L2, chloroplastic OS=Chlorella vulgaris GN=rpl2 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.306e-23 Identity = 51/81 (62.96%), Postives = 65/81 (80.25%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HNIE+ G GGQL RAAG VA+++AKEG A+L+LPSGEVRL+S+NC AT+G+VGN+ A +LG+AG WLG+RP VRG Sbjct: 142 HNIELQPGSGGQLVRAAGTVAQIVAKEGTWASLRLPSGEVRLVSQNCWATIGRVGNIDAFNLTLGKAGRSRWLGRRPHVRG 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_DESAA (50S ribosomal protein L2 OS=Desulfatibacillum alkenivorans (strain AK-01) GN=rplB PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.705e-23 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ +GKGGQ+ R AG A+L+AKEGK A ++LPSGEVRL+ C AT+GQVGNV +LG+AG K WLG+RP VRGV Sbjct: 142 HNIELKVGKGGQVVRGAGTFAQLVAKEGKYAQVRLPSGEVRLVLLKCMATIGQVGNVEHENLALGKAGRKRWLGRRPSVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_NOSP7 (50S ribosomal protein L2 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rplB PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.227e-23 Identity = 51/81 (62.96%), Postives = 62/81 (76.54%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HN+E+T GKGGQ+ RAAGA A+++AKEG TLKLPSGEVRLI ++C AT+GQVGN A S G+AG W G+RP VRG Sbjct: 142 HNVEMTPGKGGQIVRAAGASAQVVAKEGDYVTLKLPSGEVRLIRRDCYATIGQVGNTDARNLSAGKAGRNRWKGRRPKVRG 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_PELCD (50S ribosomal protein L2 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=rplB PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.908e-23 Identity = 52/82 (63.41%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ +GKGGQLAR+AG A + AKEGK A L+LPSGEVRL+ ++C ATVGQVGNV +G+AG WLGKRP RGV Sbjct: 142 HNIELKIGKGGQLARSAGTYAMIAAKEGKYAQLRLPSGEVRLVLQDCCATVGQVGNVQHENVKIGKAGRNRWLGKRPQSRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_CLOTH (50S ribosomal protein L2 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=rplB PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.908e-23 Identity = 50/82 (60.98%), Postives = 63/82 (76.83%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ GKGGQL R+AG VA+L+AKEG A ++LPSGEVR++S C AT+GQVGN+ S+G+AG K W+G RP VRGV Sbjct: 142 HNIELKPGKGGQLVRSAGNVAQLMAKEGNYAQIRLPSGEVRMVSLKCKATIGQVGNIDHENVSIGKAGRKRWMGIRPTVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_CHLRE (50S ribosomal protein L2, chloroplastic OS=Chlamydomonas reinhardtii GN=rpl2 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.908e-23 Identity = 49/81 (60.49%), Postives = 63/81 (77.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HN+E G GGQLAR+AGA+ +++AKEG T++LPS E+RL+SKNC ATVGQVGN+ A ++G+AG WLGKRP VRG Sbjct: 144 HNVEFQPGSGGQLARSAGAMVEILAKEGNFVTIRLPSKEIRLVSKNCWATVGQVGNIEAYNLTIGKAGRTRWLGKRPTVRG 224
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_GEOLS (50S ribosomal protein L2 OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=rplB PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.799e-23 Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ +GKG QLAR+AG A+L++KEGK + +KLPSGEVRL+ ++C AT+GQVGN+ LG+AG WLGKRP VRGV Sbjct: 142 HNIELKIGKGAQLARSAGTFAQLMSKEGKYSQVKLPSGEVRLVLQDCYATIGQVGNIDHENVCLGKAGRSRWLGKRPKVRGV 223 The following BLAST results are available for this feature:
BLAST of CX299948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299948 ID=CX299948; Name=CX299948; organism=Citrus clementina; type=EST; length=249bpback to top |