CX299948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_GEOUR (50S ribosomal protein L2 OS=Geobacter uraniireducens (strain Rf4) GN=rplB PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.479e-23 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ +GKG QLAR+AG A+L+AKE K A +KLPSGEVR++ +C ATVGQVGN+ S+G+AG WLGKRP VRGV Sbjct: 142 HNIELKIGKGAQLARSAGTFAQLMAKEDKYAQVKLPSGEVRMVLLDCIATVGQVGNIDHENVSIGKAGRSRWLGKRPKVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_ANAVT (50S ribosomal protein L2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplB PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.479e-23 Identity = 49/81 (60.49%), Postives = 60/81 (74.07%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HN+E+ GKGGQ+ R+AGA A+++AKEG TLKLPSGEVRLI + C AT+GQVGN A S G+AG W G+RP VRG Sbjct: 142 HNVELKAGKGGQIVRSAGATAQVVAKEGNYVTLKLPSGEVRLIRRECYATIGQVGNTDARNLSAGKAGRNRWKGRRPKVRG 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_ANASP (50S ribosomal protein L2 OS=Anabaena sp. (strain PCC 7120) GN=rplB PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.479e-23 Identity = 49/81 (60.49%), Postives = 60/81 (74.07%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HN+E+ GKGGQ+ R+AGA A+++AKEG TLKLPSGEVRLI + C AT+GQVGN A S G+AG W G+RP VRG Sbjct: 142 HNVELKAGKGGQIVRSAGATAQVVAKEGNYVTLKLPSGEVRLIRRECYATIGQVGNTDARNLSAGKAGRNRWKGRRPKVRG 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_SYNFM (50S ribosomal protein L2 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rplB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.462e-23 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HN+E+ GKGGQLAR+AG+ +LIAKEG A L+LPS E+R++ +C ATVGQVGN+ SLG+AG K WLGKRP VRGV Sbjct: 142 HNVELKPGKGGQLARSAGSSIQLIAKEGTHAILRLPSSEMRMVPISCKATVGQVGNIDHENLSLGKAGRKRWLGKRPHVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_GEOSM (50S ribosomal protein L2 OS=Geobacter sp. (strain M21) GN=rplB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.462e-23 Identity = 51/82 (62.20%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ +GKG QLAR+AG A+L+AKEGK +KLPSGEVR+I +C AT+GQVGNV S+G+AG WLG RP VRGV Sbjct: 142 HNIELKIGKGAQLARSAGTFAQLMAKEGKYGQVKLPSGEVRMILMDCKATIGQVGNVDHENVSIGKAGRSRWLGVRPHVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_ANATD (50S ribosomal protein L2 OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=rplB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.462e-23 Identity = 49/81 (60.49%), Postives = 63/81 (77.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HNIE+ GKGGQL R+AG+VA+L+AKEGK A +KLPSGE+R +S+ C AT+GQVGN+ +G+AG K W+G RP VRG Sbjct: 143 HNIELMPGKGGQLCRSAGSVAQLMAKEGKYALIKLPSGELRYVSQECRATIGQVGNLDHENVRIGKAGRKRWMGIRPTVRG 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_CYAPA (50S ribosomal protein L2, cyanelle OS=Cyanophora paradoxa GN=rpl2 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.462e-23 Identity = 49/82 (59.76%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+T GKGGQL R+AG+ A+L+AKEG TL+LPSGE+R + K C AT+GQ+GN + S+G+AG WLG RP VRGV Sbjct: 142 HNIELTPGKGGQLVRSAGSSAQLLAKEGNYVTLRLPSGEMRFVRKECYATIGQIGNAEISNISIGKAGRNRWLGIRPTVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_SYNJA (50S ribosomal protein L2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rplB PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.105e-22 Identity = 50/81 (61.73%), Postives = 63/81 (77.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HN+E+ G+GGQ+ RAAGA A+++AKEGK +LKLPSGEVR+I C AT+GQVGNV + SLG+AG WLG+RP VRG Sbjct: 148 HNVELYPGRGGQIVRAAGAGAQVVAKEGKYVSLKLPSGEVRMIRGECYATIGQVGNVDHSNLSLGKAGRSRWLGRRPHVRG 228
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_GEOSF (50S ribosomal protein L2 OS=Geobacter sp. (strain FRC-32) GN=rplB PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.105e-22 Identity = 50/82 (60.98%), Postives = 63/82 (76.83%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ +GKG QLAR+AG A+L+AKE K A +KLPSGEVR++ +C AT+GQVGN+ S+G+AG WLGKRP VRGV Sbjct: 142 HNIELKIGKGAQLARSAGTFAQLMAKEEKYAQVKLPSGEVRMVLMDCMATIGQVGNLDHENVSIGKAGRSRWLGKRPKVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_DESMR (50S ribosomal protein L2 OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=rplB PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.105e-22 Identity = 51/82 (62.20%), Postives = 61/82 (74.39%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ G+GGQ+ RAAG A+L+AKEGK A L+LPSGEVR + C AT+GQVGNV S+G+AG WLGKRP VRGV Sbjct: 142 HNIELNPGRGGQMCRAAGTYAQLVAKEGKYALLRLPSGEVRNVLSTCLATIGQVGNVMHENISIGKAGRNRWLGKRPEVRGV 223 The following BLAST results are available for this feature:
BLAST of CX299948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299948 ID=CX299948; Name=CX299948; organism=Citrus clementina; type=EST; length=249bpback to top |