CX299948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_SYNP6 (50S ribosomal protein L2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rplB PE=3 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 1.443e-22 Identity = 49/81 (60.49%), Postives = 59/81 (72.84%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HN+E+ GKGGQ+ RAAGA A+++AKEG LKLPS EVRL+ K C AT+G VGN SLG+AG K WLG+RP VRG Sbjct: 142 HNVELVAGKGGQIVRAAGASAQVVAKEGNYVALKLPSTEVRLVRKECYATIGAVGNAEVRNTSLGKAGRKRWLGRRPEVRG 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_SYNJB (50S ribosomal protein L2 OS=Synechococcus sp. GN=rplB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.443e-22 Identity = 49/81 (60.49%), Postives = 63/81 (77.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HN+E+ G+GGQ+ RAAGA A+++A+EGK +LKLPSGEVR+I C AT+GQ+GNV N SLG+AG WLG+RP VRG Sbjct: 148 HNVELYPGRGGQMVRAAGAGAQVVAREGKYVSLKLPSGEVRMIRGECYATIGQLGNVDHNNISLGKAGRSRWLGRRPKVRG 228
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_SYNE7 (50S ribosomal protein L2 OS=Synechococcus elongatus (strain PCC 7942) GN=rplB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.443e-22 Identity = 49/81 (60.49%), Postives = 59/81 (72.84%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HN+E+ GKGGQ+ RAAGA A+++AKEG LKLPS EVRL+ K C AT+G VGN SLG+AG K WLG+RP VRG Sbjct: 142 HNVELVAGKGGQIVRAAGASAQVVAKEGNYVALKLPSTEVRLVRKECYATIGAVGNAEVRNTSLGKAGRKRWLGRRPEVRG 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_DESDA (50S ribosomal protein L2 OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=rplB PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.885e-22 Identity = 53/82 (64.63%), Postives = 60/82 (73.17%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ GKGGQL RAAG A+L+AKEGK A L+LPSGEVR + C ATVGQVGNV LG+AG WLG+RP VRGV Sbjct: 148 HNIELYPGKGGQLCRAAGTYAQLVAKEGKYALLRLPSGEVRKVLVTCVATVGQVGNVHHESIRLGKAGRNRWLGRRPKVRGV 229
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_GEOBB (50S ribosomal protein L2 OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=rplB PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.462e-22 Identity = 50/82 (60.98%), Postives = 61/82 (74.39%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ +GKG QLAR+AG A+L+AKEGK +KLPSGEVR+I +C AT+GQVGN S+G+AG WLG RP VRGV Sbjct: 142 HNIELKIGKGAQLARSAGTFAQLMAKEGKYGQVKLPSGEVRMILMDCKATIGQVGNADHENVSIGKAGRSRWLGVRPHVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_PORYE (50S ribosomal protein L2, chloroplastic OS=Porphyra yezoensis GN=rpl2 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.462e-22 Identity = 49/82 (59.76%), Postives = 61/82 (74.39%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ GGQ+ RAAG A+++AKEG T+KLPS EVR+I K C AT+GQVGN+ A+ +LG+AG WLGKRP VRGV Sbjct: 142 HNIELRPSCGGQIVRAAGTYAQIVAKEGTFVTVKLPSSEVRMIRKECYATIGQVGNIDASNITLGKAGRNRWLGKRPTVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_GRATL (50S ribosomal protein L2, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=rpl2 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.462e-22 Identity = 50/82 (60.98%), Postives = 61/82 (74.39%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ KGGQ+ RAAG A+++AKEG TLKLPS EVRLI K C AT+GQVGN+ A+ ++G+AG WL KRP VRGV Sbjct: 142 HNIELNPLKGGQIVRAAGTYAQIVAKEGAFVTLKLPSNEVRLIRKECFATIGQVGNIDASNINIGKAGRNRWLSKRPKVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_TREDE (50S ribosomal protein L2 OS=Treponema denticola GN=rplB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.216e-22 Identity = 48/82 (58.54%), Postives = 63/82 (76.83%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+T+G+GGQ+AR+AGA A + AKEG+ T++LPSGE RL++K C AT+G+VGN SLG+AG WLG RP VRG+ Sbjct: 142 HNIELTIGRGGQMARSAGAGALVAAKEGEYVTIRLPSGETRLVNKKCYATIGEVGNEDHMNTSLGKAGRSRWLGIRPTVRGM 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_MOOTA (50S ribosomal protein L2 OS=Moorella thermoacetica (strain ATCC 39073) GN=rplB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.216e-22 Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HN+E+ GKGGQ+AR+AGA A+L+AKEG A L+LPSGEVR + ++C ATVGQVGN+ ++G+AG K WLG RP VRGV Sbjct: 142 HNVELKPGKGGQMARSAGAGAQLMAKEGGYALLRLPSGEVRKVQESCRATVGQVGNLDWENINIGKAGRKRWLGIRPTVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_DESVV (50S ribosomal protein L2 OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=rplB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.216e-22 Identity = 52/82 (63.41%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ G+GGQ RAAG A+L+AKEGK A L+LPSGEVR + C ATVGQVGNV SLG+AG WLG RP VRGV Sbjct: 142 HNIELQPGRGGQFCRAAGTYAQLVAKEGKYALLRLPSGEVRKVLAACCATVGQVGNVNHENISLGKAGRARWLGNRPKVRGV 223 The following BLAST results are available for this feature:
BLAST of CX299948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299948 ID=CX299948; Name=CX299948; organism=Citrus clementina; type=EST; length=249bpback to top |