CX299948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_THETN (50S ribosomal protein L2 OS=Thermoanaerobacter tengcongensis GN=rplB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.596e-21 Identity = 47/81 (58.02%), Postives = 59/81 (72.84%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HNIE+ GKGGQL RAAGA A+L+AKEG +++PSGE+RLI+ NC AT+GQV N+ +G+AG WLG RP VRG Sbjct: 142 HNIELIPGKGGQLVRAAGAAAQLMAKEGDYVHIRMPSGEIRLINANCRATIGQVSNIDHENVKIGKAGRSRWLGIRPTVRG 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_SOLUE (50S ribosomal protein L2 OS=Solibacter usitatus (strain Ellin6076) GN=rplB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.596e-21 Identity = 49/82 (59.76%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ GKGGQ+AR+AG+ A+L+++EG A LKLPSGE+R ++ C ATVGQVGNV SLG+AG K W+GK P RGV Sbjct: 142 HNIELKPGKGGQMARSAGSQAQLVSREGGLALLKLPSGEIRRVAVECMATVGQVGNVDHENVSLGKAGRKRWMGKTPHNRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_LAWIP (50S ribosomal protein L2 OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=rplB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.596e-21 Identity = 49/82 (59.76%), Postives = 63/82 (76.83%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ G+GGQL R+AGA A+L+A+EGK A L++PSGEVR + + +ATVGQVGN+ SLG+AG WLG+RP VRGV Sbjct: 142 HNIELNPGRGGQLCRSAGAYAQLVAREGKYALLRMPSGEVRKVLASGAATVGQVGNIHHENISLGKAGRNRWLGRRPKVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_NEPOL (50S ribosomal protein L2, chloroplastic OS=Nephroselmis olivacea GN=rpl2 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.084e-21 Identity = 50/81 (61.73%), Postives = 63/81 (77.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HNIE+ GGQL RAAGAVA+L+AKEG TL++PSGEVRL++K+C ATVGQVG+V + +LG+AG WL +RP VRG Sbjct: 142 HNIELRPYNGGQLVRAAGAVAQLVAKEGGFGTLRMPSGEVRLVAKDCWATVGQVGHVESINLTLGKAGRSRWLDRRPRVRG 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_DICTD (50S ribosomal protein L2 OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=rplB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.722e-21 Identity = 47/81 (58.02%), Postives = 59/81 (72.84%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HN+E+ G+GGQL RAAG A+++ KEGK A ++LPSGE+RL NC AT+GQV NV SLG+AG WLG+RP VRG Sbjct: 142 HNLELYPGRGGQLVRAAGTAAQILGKEGKWAYVRLPSGEIRLFDLNCRATIGQVSNVDHQNVSLGKAGRSRWLGRRPHVRG 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_DICT6 (50S ribosomal protein L2 OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=rplB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.722e-21 Identity = 47/81 (58.02%), Postives = 59/81 (72.84%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HN+E+ G+GGQL RAAG A+++ KEGK A ++LPSGE+RL NC AT+GQV NV SLG+AG WLG+RP VRG Sbjct: 142 HNLELYPGRGGQLVRAAGTAAQILGKEGKWAYVRLPSGEIRLFDLNCRATIGQVSNVDHQNVSLGKAGRSRWLGRRPHVRG 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_CYACA (50S ribosomal protein L2, chloroplastic OS=Cyanidium caldarium GN=rpl2 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.722e-21 Identity = 48/81 (59.26%), Postives = 58/81 (71.60%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HNIE+ GKGGQ+ARAAG AKLIAK T+KLPSGE+RL C AT+G+VGN+ N + +G+AG WLG RP VRG Sbjct: 143 HNIELIHGKGGQVARAAGTSAKLIAKSQDYVTIKLPSGEIRLFRGECYATIGKVGNIDHNNEKIGKAGRNRWLGIRPTVRG 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_BORRA (50S ribosomal protein L2 OS=Borrelia recurrentis (strain A1) GN=rplB PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.555e-21 Identity = 47/82 (57.32%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ +GKGGQL R AG A +IA +G T+KLPSGE+R+I K C AT+G+VGN S+G+AG WLG+RP VRGV Sbjct: 144 HNIELNIGKGGQLVRGAGGYAMIIASDGDYVTVKLPSGEMRMIFKKCIATLGEVGNEDYMNVSIGKAGKSRWLGRRPKVRGV 225
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_BORDL (50S ribosomal protein L2 OS=Borrelia duttonii (strain Ly) GN=rplB PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.555e-21 Identity = 47/82 (57.32%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ +GKGGQL R AG A +IA +G T+KLPSGE+R+I K C AT+G+VGN S+G+AG WLG+RP VRGV Sbjct: 144 HNIELNIGKGGQLVRGAGGYAMIIASDGDYVTVKLPSGEMRMIFKKCIATLGEVGNEDYMNVSIGKAGKSRWLGRRPKVRGV 225
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_SCEOB (50S ribosomal protein L2, chloroplastic OS=Scenedesmus obliquus GN=rpl2 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.555e-21 Identity = 48/81 (59.26%), Postives = 60/81 (74.07%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HN+E G GGQLAR+AGA+ ++AKEG T++LPS E+RLISKN AT+GQVGN+ A +G+AG WLGKRP VRG Sbjct: 142 HNVEFQPGSGGQLARSAGALLDILAKEGNFVTVRLPSKEIRLISKNSWATIGQVGNLEAYSIRIGKAGRNRWLGKRPTVRG 222 The following BLAST results are available for this feature:
BLAST of CX299948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299948 ID=CX299948; Name=CX299948; organism=Citrus clementina; type=EST; length=249bpback to top |