CX299948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_ROSCS (50S ribosomal protein L2 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=rplB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.643e-21 Identity = 47/81 (58.02%), Postives = 60/81 (74.07%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HNIE+ G+GG + R+AGA A+L+AKEG ATL++PSGEVR + C AT+GQVGN+ LG+AG K WLG+RP VRG Sbjct: 142 HNIELEKGRGGVMVRSAGAAAQLMAKEGNYATLRMPSGEVRRVFIECMATIGQVGNLDHQNVRLGKAGRKRWLGRRPEVRG 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_HELMI (50S ribosomal protein L2 OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=rplB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.643e-21 Identity = 48/82 (58.54%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 H IE+ GKGGQL R+AGA A+L+AKEG+ ATL+LPSGE+R + C AT+GQ+GN+ ++G+AG K WLG RP VRGV Sbjct: 142 HCIEMRPGKGGQLVRSAGAAAQLMAKEGEHATLRLPSGEMRKVLAECRATIGQMGNLEHENITIGKAGRKRWLGIRPTVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_FINM2 (50S ribosomal protein L2 OS=Finegoldia magna (strain ATCC 29328) GN=rplB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.643e-21 Identity = 50/81 (61.73%), Postives = 60/81 (74.07%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HNIE+ +GKG QL R AGA A+L+AKEGK A L+LPSGE RLI +C ATVGQVGN+ ++G+AG LGKRP VRG Sbjct: 142 HNIEMKVGKGAQLVRTAGAEAQLMAKEGKFAQLRLPSGEFRLIHLDCKATVGQVGNISHELVTIGKAGRNRHLGKRPYVRG 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_DESDG (50S ribosomal protein L2 OS=Desulfovibrio desulfuricans (strain G20) GN=rplB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.643e-21 Identity = 48/82 (58.54%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIE+ GKGGQ RAAG A+L+AKEG A L++PSGEVR + C AT+GQVGN+ + S G+AG WLG+RP VRGV Sbjct: 142 HNIELYPGKGGQFCRAAGTYAQLVAKEGNYALLRMPSGEVRKVLVTCCATIGQVGNLDHEKISYGKAGRSRWLGRRPKVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_GUITH (50S ribosomal protein L2, chloroplastic OS=Guillardia theta GN=rpl2 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.643e-21 Identity = 45/82 (54.88%), Postives = 61/82 (74.39%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HN+E+ G+GGQ+ R+AG A+++AK+G+ T+K+PS EVR+I KNC AT+G+VGN LG+AG K WLG RP VRGV Sbjct: 142 HNVELIPGRGGQIVRSAGTSAQVVAKDGQVVTIKMPSNEVRMIYKNCYATIGEVGNADIKNIRLGKAGRKRWLGIRPSVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_CLOD6 (50S ribosomal protein L2 OS=Clostridium difficile (strain 630) GN=rplB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.064e-21 Identity = 48/81 (59.26%), Postives = 61/81 (75.31%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HNIE+ GKG QL R+AG A+L+AKEGK+A L+LPSGE+RL+S NC AT+GQVGN+ +G+AG K +G RP VRG Sbjct: 142 HNIELKPGKGAQLVRSAGVSAQLMAKEGKNALLRLPSGEMRLVSINCKATIGQVGNIEHGNVVIGKAGRKRHMGIRPTVRG 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_ROSS1 (50S ribosomal protein L2 OS=Roseiflexus sp. (strain RS-1) GN=rplB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 7.920e-21 Identity = 46/81 (56.79%), Postives = 60/81 (74.07%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HN+E+ G+GG + R+AGA A+L+AKEG ATL++PSGEVR + C AT+GQVGN+ LG+AG K WLG+RP VRG Sbjct: 142 HNVELEKGRGGVMVRSAGAAAQLMAKEGNYATLRMPSGEVRRVFIECMATIGQVGNLDHQNIRLGKAGRKRWLGRRPEVRG 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_DESHY (50S ribosomal protein L2 OS=Desulfitobacterium hafniense (strain Y51) GN=rplB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 7.920e-21 Identity = 47/81 (58.02%), Postives = 61/81 (75.31%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HNIE+ GKG QL R+AG A+L+AKEGK ATL+LPSGE+R++ +C AT+GQVGN+ ++G+AG WLG RP VRG Sbjct: 142 HNIEMKPGKGAQLVRSAGGSAQLMAKEGKYATLRLPSGEMRMVHIDCRATIGQVGNLEHENINIGKAGRSRWLGIRPTVRG 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_DESHD (50S ribosomal protein L2 OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=rplB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 7.920e-21 Identity = 47/81 (58.02%), Postives = 61/81 (75.31%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HNIE+ GKG QL R+AG A+L+AKEGK ATL+LPSGE+R++ +C AT+GQVGN+ ++G+AG WLG RP VRG Sbjct: 142 HNIEMKPGKGAQLVRSAGGSAQLMAKEGKYATLRLPSGEMRMVHIDCRATIGQVGNLEHENINIGKAGRSRWLGIRPTVRG 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RL2_TRIEI (50S ribosomal protein L2 OS=Trichodesmium erythraeum (strain IMS101) GN=rplB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20 Identity = 45/81 (55.56%), Postives = 60/81 (74.07%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRG 244 HN+E+ GKGGQ+ R+AGAVA+++AKE + T+KLPSGE R + +C AT+GQ+GN+ SLG+AG W GKRP VRG Sbjct: 142 HNVELVPGKGGQMVRSAGAVAQVVAKEDQYVTIKLPSGERRKVRASCYATLGQIGNIEHRNISLGKAGRNRWKGKRPTVRG 222 The following BLAST results are available for this feature:
BLAST of CX299948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299948 ID=CX299948; Name=CX299948; organism=Citrus clementina; type=EST; length=249bpback to top |