CX299948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_CALFG (50S ribosomal protein L2, chloroplastic OS=Calycanthus floridus var. glaucus GN=rpl2 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 5.460e-38 Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_OENPA (50S ribosomal protein L2, chloroplastic OS=Oenothera parviflora GN=rpl2-A PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.313e-38 Identity = 79/82 (96.34%), Postives = 79/82 (96.34%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLIS NCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 139 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 220
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_OENGL (50S ribosomal protein L2, chloroplastic OS=Oenothera glazioviana GN=rpl2-A PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.313e-38 Identity = 79/82 (96.34%), Postives = 79/82 (96.34%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLIS NCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 139 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 220
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_OENEH (50S ribosomal protein L2, chloroplastic OS=Oenothera elata subsp. hookeri GN=rpl2-A PE=3 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 9.313e-38 Identity = 79/82 (96.34%), Postives = 79/82 (96.34%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLIS NCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 139 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 220
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_OENBI (50S ribosomal protein L2, chloroplastic OS=Oenothera biennis GN=rpl2-A PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.313e-38 Identity = 79/82 (96.34%), Postives = 79/82 (96.34%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLIS NCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 139 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 220
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_OENAR (50S ribosomal protein L2, chloroplastic OS=Oenothera argillicola GN=rpl2-A PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.313e-38 Identity = 79/82 (96.34%), Postives = 79/82 (96.34%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLIS NCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 139 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 220
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_IPOPU (50S ribosomal protein L2, chloroplastic OS=Ipomoea purpurea GN=rpl2 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.313e-38 Identity = 78/82 (95.12%), Postives = 80/82 (97.56%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSAT+KLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAG+K WLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATIKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGAKRWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2B_ATRBE (50S ribosomal protein L2-B, chloroplastic OS=Atropa belladonna GN=rpl2-B PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.313e-38 Identity = 79/82 (96.34%), Postives = 79/82 (96.34%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAV KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVPKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_PANGI (50S ribosomal protein L2, chloroplastic OS=Panax ginseng GN=rpl2-A PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.216e-37 Identity = 79/82 (96.34%), Postives = 79/82 (96.34%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEIT GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 140 HNIEITRGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_NICDE (50S ribosomal protein L2, chloroplastic OS=Nicotiana debneyi GN=rpl2 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.216e-37 Identity = 79/82 (96.34%), Postives = 79/82 (96.34%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVR ISKNCSATVGQVGNVG NQKSLGRAGSK WLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRSISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGV 221 The following BLAST results are available for this feature:
BLAST of CX299948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299948 ID=CX299948; Name=CX299948; organism=Citrus clementina; type=EST; length=249bpback to top |