CX299948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_ORYSA (50S ribosomal protein L2, chloroplastic OS=Oryza sativa GN=rpl2-A PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 4.622e-37 Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEIT G+GGQLARAAGAVAKLIAKEGKSATL+LPSGEVRL+S+NC ATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITRGRGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_ORYNI (50S ribosomal protein L2, chloroplastic OS=Oryza nivara GN=rpl2-A PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 4.622e-37 Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEIT G+GGQLARAAGAVAKLIAKEGKSATL+LPSGEVRL+S+NC ATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITRGRGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_LOLPR (50S ribosomal protein L2, chloroplastic OS=Lolium perenne GN=rpl2-A PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 4.622e-37 Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEIT G+GGQLARAAGAVAKLIAKEGKSATL+LPSGEVRL+S+NC ATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITRGRGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_HORVU (50S ribosomal protein L2, chloroplastic OS=Hordeum vulgare GN=rpl2-A PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 4.622e-37 Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEIT G+GGQLARAAGAVAKLIAKEGKSATL+LPSGEVRL+S+NC ATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITRGRGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_AGRST (50S ribosomal protein L2, chloroplastic OS=Agrostis stolonifera GN=rpl2-A PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 4.622e-37 Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEIT G+GGQLARAAGAVAKLIAKEGKSATL+LPSGEVRL+S+NC ATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITRGRGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: YCF72_SACOF (Uncharacterized protein ycf72 OS=Saccharum officinarum GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 7.857e-37 Identity = 70/83 (84.34%), Postives = 73/83 (87.95%), Query Frame = -1 Query: 1 TTPLTTGRFPSQHLDPALPKLFWFAPTFPTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFATAPAALANCPPFPSVISMLC 249 TTPLTTGR PSQHLDPALPKLFWF PT PTCPTVA+QF D KRTSP+GN VA+ PSFAISFATAPAALANCPP P VISMLC Sbjct: 18 TTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVANLPSFAISFATAPAALANCPPLPRVISMLC 100
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: YCF72_SACHY (Uncharacterized protein ycf72 OS=Saccharum hybrid GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 7.857e-37 Identity = 70/83 (84.34%), Postives = 73/83 (87.95%), Query Frame = -1 Query: 1 TTPLTTGRFPSQHLDPALPKLFWFAPTFPTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFATAPAALANCPPFPSVISMLC 249 TTPLTTGR PSQHLDPALPKLFWF PT PTCPTVA+QF D KRTSP+GN VA+ PSFAISFATAPAALANCPP P VISMLC Sbjct: 18 TTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVANLPSFAISFATAPAALANCPPLPRVISMLC 100
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: YCF72_MAIZE (Uncharacterized protein ycf72 OS=Zea mays GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 7.857e-37 Identity = 70/83 (84.34%), Postives = 73/83 (87.95%), Query Frame = -1 Query: 1 TTPLTTGRFPSQHLDPALPKLFWFAPTFPTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFATAPAALANCPPFPSVISMLC 249 TTPLTTGR PSQHLDPALPKLFWF PT PTCPTVA+QF D KRTSP+GN VA+ PSFAISFATAPAALANCPP P VISMLC Sbjct: 18 TTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVANLPSFAISFATAPAALANCPPLPRVISMLC 100
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_PEA (50S ribosomal protein L2, chloroplastic OS=Pisum sativum GN=rpl2 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 7.884e-37 Identity = 77/82 (93.90%), Postives = 78/82 (95.12%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGR G+K W GKRPVVRGV Sbjct: 139 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRVGAKRWRGKRPVVRGV 220
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_EPIVI (50S ribosomal protein L2, plastid OS=Epifagus virginiana GN=rpl2-A PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.030e-36 Identity = 77/82 (93.90%), Postives = 78/82 (95.12%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQL RAAGAVAKLIAKEGK ATLKLPSGEVRLISKNCSATVGQVGNVG N+KSLGRAGSK WLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLVRAAGAVAKLIAKEGKLATLKLPSGEVRLISKNCSATVGQVGNVGVNKKSLGRAGSKRWLGKRPVVRGV 221 The following BLAST results are available for this feature:
BLAST of CX299948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299948 ID=CX299948; Name=CX299948; organism=Citrus clementina; type=EST; length=249bpback to top |