CX299949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_STAS1 (Nucleoside diphosphate kinase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=ndk PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.713e-35 Identity = 75/133 (56.39%), Postives = 90/133 (67.67%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 415 L+GEII R E+KG L G K MTV + AE+HY + + KPF+ LI +ITS PV AM+ EGE V R IIG TNP+++ PGTIRGDL + GRNIIHGSDSVESA KEI LWF D + S W+YE Sbjct: 17 LIGEIISRIERKGLKLVGGKFMTVPQSLAEEHYAEHTDKPFYKHLISFITSAPVFAMVVEGEDAVHVARHIIGKTNPSEATPGTIRGDLGLTVGRNIIHGSDSVESANKEINLWFKADELSEYSESRESWLYE 149
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_PROM2 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9215) GN=ndk PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.713e-35 Identity = 72/131 (54.96%), Postives = 93/131 (70.99%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 406 G V EII RFEKKGF L GLK + + A+ HY +PFFG L+++I+SGPVVAM+WEGEGV+ + R +IGAT P ++ PGTIRGDLAI GRNIIHGSD ++A+ EI LWF + + W++S W Sbjct: 18 GYVAEIIGRFEKKGFKLVGLKQLIPSKDLAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEDTAKFEIDLWFNEEELCEWETSDAKW 148
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_STAES (Nucleoside diphosphate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=ndk PE=3 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 6.155e-35 Identity = 73/133 (54.89%), Postives = 89/133 (66.92%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 415 L+GEII R EKKG L G K M V AEKHY + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP+++APGTIRGD + GRNIIHGSDS ESAQ+E+ LWF I +++ W+YE Sbjct: 17 LIGEIISRIEKKGLKLVGGKFMQVPMELAEKHYSEHEGKPFYDKLISFITSAPVFAMVVEGENAVAVSRKIIGSTNPSEAAPGTIRGDYGLNLGRNIIHGSDSTESAQREVKLWFTSSEIADYKEPREDWLYE 149
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_STAEQ (Nucleoside diphosphate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ndk PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.155e-35 Identity = 73/133 (54.89%), Postives = 89/133 (66.92%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 415 L+GEII R EKKG L G K M V AEKHY + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP+++APGTIRGD + GRNIIHGSDS ESAQ+E+ LWF I +++ W+YE Sbjct: 17 LIGEIISRIEKKGLKLVGGKFMQVPMELAEKHYSEHEGKPFYDKLISFITSAPVFAMVVEGENAVAVSRKIIGSTNPSEAAPGTIRGDYGLNLGRNIIHGSDSTESAQREVKLWFTSSEIADYKEPREDWLYE 149
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_PROMS (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain AS9601) GN=ndk PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.155e-35 Identity = 71/131 (54.20%), Postives = 93/131 (70.99%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 406 G V EI+ RFEKKGF L GLK + + A+ HY +PFFG L+++I+SGPVVAM+WEGEGV+ + R +IGAT P ++ PGTIRGDLAI GRNIIHGSD ++A+ EI LWF + + W++S W Sbjct: 18 GYVSEILGRFEKKGFKLVGLKQLIPSKELAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEDTAKFEINLWFNEEELCEWETSDSKW 148
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_PROM9 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9312) GN=ndk PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.038e-35 Identity = 72/131 (54.96%), Postives = 92/131 (70.23%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 406 G V EII RFEKKGF L GLK + + A+ HY +PFFG L+++I+SGPVVAM+WEGEGV+ + R +IGAT P ++ PGTIRGDLAI GRNIIHGSD ++A+ EI LWF + + W +S W Sbjct: 18 GYVSEIIGRFEKKGFKLVGLKQLIPSKDLAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEDTAKFEIDLWFNEEELCEWYTSDSKW 148
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_PROM5 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=ndk PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.038e-35 Identity = 75/134 (55.97%), Postives = 92/134 (68.66%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 415 G + EII RFEKKGF L GLK + + A+ HY +PFF L+ +I+SGPVVAMIWEGEGV+ + R IIGAT P ++ PGTIRGDLAI GRNIIHGSD E+A+ EI LWF I +W++S W E Sbjct: 18 GYIAEIIGRFEKKGFKLVGLKQLIPSKQLAQDHYGVHRERPFFKDLVNFISSGPVVAMIWEGEGVILSARKIIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEETAKFEINLWFDQHEICDWETSDSEWRVE 151
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_PROMP (Nucleoside diphosphate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ndk PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.050e-34 Identity = 74/131 (56.49%), Postives = 92/131 (70.23%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 406 G V +II RFEKKGF L GLK + + A+ HY +PFF L+E+I+SGPVVAMIWEGEGV+ + R +IGAT P ++ PGTIRGDLAI GRNIIHGSD E+A+ EI LWF I +W++S W Sbjct: 18 GYVSDIIGRFEKKGFKLVGLKQLIPTKQLAQDHYGVHRERPFFKDLVEFISSGPVVAMIWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEETAKFEINLWFNQDEICDWETSDSEW 148
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_PROM4 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=ndk PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.050e-34 Identity = 73/134 (54.48%), Postives = 90/134 (67.16%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 415 GLVGEI+ RFE+KGF L LK + R AE+HY +PFF L+++ITSGPV+AMIWEGEGV+ R +IG+T P + PGTIRGDLAI GRN+IHGSD E+A EI LWF + +W S W E Sbjct: 18 GLVGEILSRFERKGFKLIALKQLIPSRALAEQHYGVHRERPFFKGLVDFITSGPVIAMIWEGEGVILGARKLIGSTKPLDADPGTIRGDLAIDIGRNVIHGSDGPETASFEIGLWFESSELSDWNPSDQLWRVE 151
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_BACLD (Nucleoside diphosphate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=ndk PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.050e-34 Identity = 69/132 (52.27%), Postives = 93/132 (70.45%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIY 412 L+GEI++RFE+KG L G KLM V A +HY++ + KPFFG L+++ITSGPV AM+WEGE + R +IG TNP ++ PGTIRGD + G+NIIHGSDS ESA +EI L+F D + + ++ WIY Sbjct: 17 LIGEILLRFERKGLQLIGAKLMKVSEETAGEHYKEHNGKPFFGELVDFITSGPVFAMVWEGEDAIAVARQLIGKTNPKEALPGTIRGDFGMFVGKNIIHGSDSPESAAREINLFFKEDELVEDEKLMNQWIY 148 The following BLAST results are available for this feature:
BLAST of CX299949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299949 ID=CX299949; Name=CX299949; organism=Citrus clementina; type=EST; length=686bpback to top |