CX299949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_FRASC (Nucleoside diphosphate kinase OS=Frankia sp. (strain CcI3) GN=ndk PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.734e-32 Identity = 63/117 (53.85%), Postives = 92/117 (78.63%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 367 GLVGE++ R E+KG +L L+L T++R AE HY + +SKPFFG L+++ITSGP+VA++ EG V+ R +IGAT+P ++APG++RGD A+ G+N++HGSDS ESA++EI L+FP Sbjct: 18 GLVGEVVGRLERKGLTLVALELRTLERSVAETHYGEHASKPFFGELVDFITSGPLVALVAEGPRAVEASRGLIGATDPVKAAPGSLRGDYALEIGQNLVHGSDSPESAKREIDLFFP 134
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_CORU7 (Nucleoside diphosphate kinase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=ndk PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.734e-32 Identity = 66/119 (55.46%), Postives = 85/119 (71.43%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 370 G VGEII R E+KG L + L T DR AEKHYE+ KPFFG L+++ITS P+VA I EGE + R + G T+P ++A PGTIRGD A+ G N++HGSDS ESA++EIA+WFP+ Sbjct: 17 GHVGEIISRIERKGLKLVEMDLRTADRATAEKHYEEHKDKPFFGELVDFITSAPLVAGIVEGESAIAAWRQLAGGTHPVEAATPGTIRGDFALTVGENVVHGSDSPESAEREIAIWFPN 135
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_THETN (Nucleoside diphosphate kinase OS=Thermoanaerobacter tengcongensis GN=ndk PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.877e-32 Identity = 68/118 (57.63%), Postives = 83/118 (70.34%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 370 GL+GEI+ R+E KG LK K++T EKHYE+ KPFF LIEY++SGPV AM+ EGE VK R I GAT + PGTIRGD A T N++HGSDSVESA++EIALWFP+ Sbjct: 19 GLIGEILKRYENKGLRLKAAKVVTPSIELLEKHYEEHKGKPFFKPLIEYMSSGPVFAMVLEGENAVKLVRMINGATKVEDALPGTIRGDFASSTTYNVVHGSDSVESAKREIALWFPE 136
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_CORJK (Nucleoside diphosphate kinase OS=Corynebacterium jeikeium (strain K411) GN=ndk PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.877e-32 Identity = 67/121 (55.37%), Postives = 84/121 (69.42%), Query Frame = 2 Query: 11 EGGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 370 + G VGEII R EKKG L L L T DR AEKHY + S KPFFG L+++ITS P+VA I EGE + R + G T+P + A PGTIRGD A+ G N++HGSDS ESA++EI +WFP+ Sbjct: 15 KNGHVGEIISRIEKKGLKLVELDLRTADRETAEKHYAEHSDKPFFGELVDFITSAPLVAGIVEGESAIAAWRQLAGGTHPVEKATPGTIRGDFALTVGENVVHGSDSPESAEREIGIWFPN 135
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_HALMA (Nucleoside diphosphate kinase OS=Haloarcula marismortui GN=ndk PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.369e-32 Identity = 63/136 (46.32%), Postives = 92/136 (67.65%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESA--QKEIALWFPDGP-INWQSSLHPWIYE 415 GL+G+I+ RFE +G + G K M +D+ AE+HY + KPFF L+++ITSGPV AM+WEG+ + RT++G T+PA+SAPGTIRGD + GRN+IHGSD + ++EI L+F + ++W W+YE Sbjct: 19 GLIGDIVSRFEDRGLKMVGGKFMQIDQELAEEHYGEHEDKPFFDGLVDFITSGPVFAMVWEGQDATRQVRTMMGETDPAESAPGTIRGDYGLDLGRNVIHGSDHEDEGANEREIELFFDEAELVDWDQIDSSWLYE 154
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_FRASN (Nucleoside diphosphate kinase OS=Frankia sp. (strain EAN1pec) GN=ndk PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.369e-32 Identity = 64/117 (54.70%), Postives = 91/117 (77.78%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 367 GLVGE++ R E+KG + L+L T++R AE HY + +SKPFFG L+E+ITSGP+VA++ EG V+ R +IGAT+P ++APG++RGD A+ G+N+IHGSDS ESA++EI L+FP Sbjct: 18 GLVGEVVGRIERKGLKIVALELRTLERSVAETHYGEHASKPFFGELVEFITSGPLVALVAEGPRAVEALRGLIGATDPVKAAPGSLRGDFALEIGQNLIHGSDSPESAKREIDLFFP 134
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_CORGL (Nucleoside diphosphate kinase OS=Corynebacterium glutamicum GN=ndk PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.369e-32 Identity = 65/119 (54.62%), Postives = 85/119 (71.43%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNP-AQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 370 G VGEII R E+KG L L L DR AEKHYE+ + KPFFG L+E+ITS P++A I EGE + R + G T+P A++ PGTIRGD A+ G N++HGSDS ESA++EI++WFP+ Sbjct: 17 GHVGEIIARIERKGLKLAALDLRVADRETAEKHYEEHADKPFFGELVEFITSAPLIAGIVEGERAIDAWRQLAGGTDPVAKATPGTIRGDFALTVGENVVHGSDSPESAEREISIWFPN 135
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_CORGB (Nucleoside diphosphate kinase OS=Corynebacterium glutamicum (strain R) GN=ndk PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.369e-32 Identity = 65/119 (54.62%), Postives = 85/119 (71.43%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNP-AQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 370 G VGEII R E+KG L L L DR AEKHYE+ + KPFFG L+E+ITS P++A I EGE + R + G T+P A++ PGTIRGD A+ G N++HGSDS ESA++EI++WFP+ Sbjct: 17 GHVGEIIARIERKGLKLAALDLRVADRETAEKHYEEHADKPFFGELVEFITSAPLIAGIVEGERAIDAWRQLAGGTDPVAKATPGTIRGDFALTVGENVVHGSDSPESAEREISIWFPN 135
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_CHLAD (Nucleoside diphosphate kinase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=ndk PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.369e-32 Identity = 68/136 (50.00%), Postives = 92/136 (67.65%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGE-GVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI--NWQSSLHPWIYE 415 GL+G II RFE++G +GLKLM VD A +HY + K FF L++YITS PVV + G+ G V+ RT++GATNPA++APGTIRGD + GRN+IH SDS ES ++E A++F + +W +L WIYE Sbjct: 16 GLIGAIISRFEQRGLKFQGLKLMQVDEALARRHYAEHEGKSFFEGLVKYITSAPVVVAVVAGKPGTVELVRTMVGATNPAKAAPGTIRGDFGVDIGRNLIHASDSPESGERETAIFFQPHELIGDWNRTLDGWIYE 151
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_NATPD (Nucleoside diphosphate kinase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=ndk PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.086e-31 Identity = 67/135 (49.63%), Postives = 92/135 (68.15%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVE-SAQKEIALWFPDGPI-NWQSSLHPWIYE 415 GL+G+I+ RFE +G L K M +D A +HY + KPFF L E+ITSGPV AM+WEG+ V RT++G T+PA+SAPGTIRGD + GRN+IHGSD+ SA++EI L+F D + +++ PW+YE Sbjct: 19 GLIGDIVSRFEDRGLKLVAGKFMQIDDELAREHYAEHVDKPFFDELKEFITSGPVFAMVWEGQDAVAQVRTMMGETDPAESAPGTIRGDFGLDLGRNVIHGSDTEPGSAEREIGLFFDDDELQDYERIDEPWLYE 153 The following BLAST results are available for this feature:
BLAST of CX299949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299949 ID=CX299949; Name=CX299949; organism=Citrus clementina; type=EST; length=686bpback to top |