CX299949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_COREF (Nucleoside diphosphate kinase OS=Corynebacterium efficiens GN=ndk PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.086e-31 Identity = 65/119 (54.62%), Postives = 83/119 (69.75%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 370 G VGEII R E+KG L L L DR AEKHYE+ + KPFFG L+E+ITS P++A I EGE + R + G T+P A PGTIRGD A+ G N++HGSDS ESA++EI++WFP+ Sbjct: 17 GHVGEIIARIERKGLKLAALDLRVADRETAEKHYEEHADKPFFGELVEFITSAPLIAGIVEGERAIDAWRQLAGGTDPVSKATPGTIRGDFALTVGENVVHGSDSPESAEREISIWFPN 135
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_THET8 (Nucleoside diphosphate kinase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=ndk PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.419e-31 Identity = 65/116 (56.03%), Postives = 84/116 (72.41%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 GLVGEI+ RFE+KGF + LKLM + + AE+HY + KPFF L+ +ITSGPVVAM+ EG GVV R ++GAT+P + PGTIRGD A N+IHGS ++E AQ+EIAL+F Sbjct: 16 GLVGEILARFERKGFRIAALKLMQISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPGVVAEVRKMMGATHPKDALPGTIRGDFATTIDENVIHGSATLEDAQREIALFF 131
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_THET2 (Nucleoside diphosphate kinase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=ndk PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.419e-31 Identity = 65/116 (56.03%), Postives = 84/116 (72.41%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 GLVGEI+ RFE+KGF + LKLM + + AE+HY + KPFF L+ +ITSGPVVAM+ EG GVV R ++GAT+P + PGTIRGD A N+IHGS ++E AQ+EIAL+F Sbjct: 16 GLVGEILARFERKGFRIAALKLMRISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPGVVAEVRKMMGATHPKDALPGTIRGDFATTIDENVIHGSATLEDAQREIALFF 131
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_THEPX (Nucleoside diphosphate kinase OS=Thermoanaerobacter sp. (strain X514) GN=ndk PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.419e-31 Identity = 66/118 (55.93%), Postives = 85/118 (72.03%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 370 GL+GEI+ R+E KG LK K++T EKHYE+ KP++ LI+Y++SGPV AM+ EGE VK R + GAT ++ PGTIRGD AI T NIIHGSDS+ESA++EIALWFP+ Sbjct: 16 GLIGEILKRYENKGLRLKAAKVITPTIELLEKHYEEHKGKPYYKPLIQYMSSGPVFAMVLEGENAVKIVRLLNGATKVEEALPGTIRGDFAISTTFNIIHGSDSIESAKREIALWFPE 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_THEP3 (Nucleoside diphosphate kinase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=ndk PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.419e-31 Identity = 66/118 (55.93%), Postives = 85/118 (72.03%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 370 GL+GEI+ R+E KG LK K++T EKHYE+ KP++ LI+Y++SGPV AM+ EGE VK R + GAT ++ PGTIRGD AI T NIIHGSDS+ESA++EIALWFP+ Sbjct: 16 GLIGEILKRYENKGLRLKAAKVITPTIELLEKHYEEHKGKPYYKPLIQYMSSGPVFAMVLEGENAVKIVRLLNGATKVEEALPGTIRGDFAISTTFNIIHGSDSIESAKREIALWFPE 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_FRAAA (Nucleoside diphosphate kinase OS=Frankia alni (strain ACN14a) GN=ndk PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.419e-31 Identity = 62/117 (52.99%), Postives = 91/117 (77.78%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 367 GLVGE++ R E+KG +L L+L T++R AE HY + +SKPFFG L+++I SGP+VA++ EG V+ R +IGAT+P ++APG++RGD A+ G+N++HGSDS ESA++EI L+FP Sbjct: 18 GLVGEVVGRLERKGLTLVALELRTLERSVAETHYGEHASKPFFGELVDFIVSGPLVALVAEGPRAVEASRGLIGATDPVKAAPGSLRGDYALEIGQNLVHGSDSPESAKREIDLFFP 134
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_UNCMA (Nucleoside diphosphate kinase OS=Uncultured methanogenic archaeon RC-I GN=ndk PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.853e-31 Identity = 65/134 (48.51%), Postives = 93/134 (69.40%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSL-HPWIYE 415 GLVGEII RFE++G + G+K++ V A++HY + ++KPFF L+ +I SGP VAM+ EG+ V R+++G T P +SAPGTIRGD A+ GRN+IH SDS ESA++EI+L+F I + + W+YE Sbjct: 19 GLVGEIISRFERRGLKIVGMKMLEVSEELAKQHYAEHAAKPFFPGLVSFIRSGPTVAMVIEGKDAVSMVRSMLGKTKPIESAPGTIRGDFALDMGRNVIHASDSPESAKREISLYFKTSEIATYARIDEQWLYE 152
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_MYCTU (Nucleoside diphosphate kinase OS=Mycobacterium tuberculosis GN=ndkA PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.853e-31 Identity = 68/120 (56.67%), Postives = 85/120 (70.83%), Query Frame = 2 Query: 11 EGGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQ-SAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 367 E L+GEII R E+KG ++ L+L TV A +HY + KPFFGSL+E+ITSGPVVA I EG + R + G T+P Q +APGTIRGD A+ T N++HGSDS ESAQ+EIALWFP Sbjct: 15 ERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFP 134
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_MYCTA (Nucleoside diphosphate kinase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ndk PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.853e-31 Identity = 68/120 (56.67%), Postives = 85/120 (70.83%), Query Frame = 2 Query: 11 EGGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQ-SAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 367 E L+GEII R E+KG ++ L+L TV A +HY + KPFFGSL+E+ITSGPVVA I EG + R + G T+P Q +APGTIRGD A+ T N++HGSDS ESAQ+EIALWFP Sbjct: 15 ERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFP 134
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_MYCBT (Nucleoside diphosphate kinase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=ndk PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.853e-31 Identity = 68/120 (56.67%), Postives = 85/120 (70.83%), Query Frame = 2 Query: 11 EGGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQ-SAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 367 E L+GEII R E+KG ++ L+L TV A +HY + KPFFGSL+E+ITSGPVVA I EG + R + G T+P Q +APGTIRGD A+ T N++HGSDS ESAQ+EIALWFP Sbjct: 15 ERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFP 134 The following BLAST results are available for this feature:
BLAST of CX299949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299949 ID=CX299949; Name=CX299949; organism=Citrus clementina; type=EST; length=686bpback to top |