CX299949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_MYCBP (Nucleoside diphosphate kinase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=ndk PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.853e-31 Identity = 68/120 (56.67%), Postives = 85/120 (70.83%), Query Frame = 2 Query: 11 EGGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQ-SAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 367 E L+GEII R E+KG ++ L+L TV A +HY + KPFFGSL+E+ITSGPVVA I EG + R + G T+P Q +APGTIRGD A+ T N++HGSDS ESAQ+EIALWFP Sbjct: 15 ERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFP 134
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_MYCBO (Nucleoside diphosphate kinase OS=Mycobacterium bovis GN=ndk PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.853e-31 Identity = 68/120 (56.67%), Postives = 85/120 (70.83%), Query Frame = 2 Query: 11 EGGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQ-SAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 367 E L+GEII R E+KG ++ L+L TV A +HY + KPFFGSL+E+ITSGPVVA I EG + R + G T+P Q +APGTIRGD A+ T N++HGSDS ESAQ+EIALWFP Sbjct: 15 ERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFP 134
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_CHLSY (Nucleoside diphosphate kinase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=ndk PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.420e-31 Identity = 67/136 (49.26%), Postives = 89/136 (65.44%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGE-GVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI--NWQSSLHPWIYE 415 GL+G II RFE++G +GLKLM VD A +HY + K FF L+ YITS PVV + G+ G V+ R ++GATNPA++APGTIRGD + GRN+IH SDS ES ++E A++F + W +L WIYE Sbjct: 16 GLIGAIISRFEQRGLKFQGLKLMQVDEALARRHYAEHEGKSFFNGLVSYITSAPVVVAVVAGKPGTVELVRAMVGATNPAKAAPGTIRGDFGVDIGRNLIHASDSPESGERETAIFFQPHELIGEWNRALDNWIYE 151
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_CHLAA (Nucleoside diphosphate kinase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=ndk PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.420e-31 Identity = 67/136 (49.26%), Postives = 89/136 (65.44%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGE-GVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI--NWQSSLHPWIYE 415 GL+G II RFE++G +GLKLM VD A +HY + K FF L+ YITS PVV + G+ G V+ R ++GATNPA++APGTIRGD + GRN+IH SDS ES ++E A++F + W +L WIYE Sbjct: 16 GLIGAIISRFEQRGLKFQGLKLMQVDEALARRHYAEHEGKSFFNGLVSYITSAPVVVAVVAGKPGTVELVRAMVGATNPAKAAPGTIRGDFGVDIGRNLIHASDSPESGERETAIFFQPHELIGEWNRALDNWIYE 151
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_ROSCS (Nucleoside diphosphate kinase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=ndk PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.161e-31 Identity = 65/134 (48.51%), Postives = 91/134 (67.91%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 415 GL+G I+ R E++G + GLKLM +D A +HY KPFF SLI YITSGPVV ++ G V++ R+++GATNP ++APGTIRGD A+ GRN+IH SDS E+ + E+ L+F + ++ + S WIYE Sbjct: 16 GLIGPILTRIEQRGLRIVGLKLMQIDEALARRHYAIHEGKPFFDSLIAYITSGPVVVLVVTGANVIEMVRSMVGATNPGKAAPGTIRGDFALEIGRNLIHASDSPENGEMEVNLFFRAEELVDMRRSTDQWIYE 149
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_DEIDV (Nucleoside diphosphate kinase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=ndk PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.161e-31 Identity = 63/121 (52.07%), Postives = 84/121 (69.42%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 GL EI+ R +KG+ + GLK M + R AE HY + +PFFG L+++IT GPVVA+ EGE + R ++GATNPA +APGTIR D A TG N+ HGSDS ESAQ+E+AL+F +G + Sbjct: 16 GLTPEILARIARKGYRVVGLKQMVIARETAENHYGEHRERPFFGELVDFITGGPVVAIALEGENAIAGWRAMMGATNPANAAPGTIRADFATTTGENVTHGSDSAESAQRELALFFQEGEL 136
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDKM_COLLI (Nucleoside diphosphate kinase, mitochondrial OS=Columba livia GN=NME4 PE=1 SV=3) HSP 1 Score: 135.191 bits (339), Expect = 3.161e-31 Identity = 61/125 (48.80%), Postives = 89/125 (71.20%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQS 391 LVG +I RFE++GF L +KL+ D+ +KHY+ L KPF+ +L+ Y+TSGP+VAM+WEG VV++ R ++G T+ A +A GTIRGD ++ RN++H SDSVE+AQ+EI WF + W+S Sbjct: 48 LVGNVIQRFERRGFKLVAMKLLQADQGLLDKHYQQLRQKPFYPALLAYMTSGPLVAMVWEGYNVVRSTRAMVGDTDSAVAAAGTIRGDFSMHVSRNVVHASDSVETAQREIGFWFQRNELVAWES 172
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_ROSS1 (Nucleoside diphosphate kinase OS=Roseiflexus sp. (strain RS-1) GN=ndk PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.128e-31 Identity = 63/134 (47.01%), Postives = 91/134 (67.91%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 415 GL+G I+ R E++G + G+KLM +D A +HY K FF SLI YITSGPVV ++ G+ +++ R+++GATNP ++APGTIRGD A+ GRN+IH SDS E+ + E++L+F P+ + S WIYE Sbjct: 16 GLIGPILTRIEQRGLRIVGMKLMQIDESLARRHYAIHEGKAFFDSLITYITSGPVVVLVVTGKNIIEIVRSMVGATNPVKAAPGTIRGDFALDIGRNLIHASDSPENGEMEVSLFFRPEELVEMHRSTDQWIYE 149
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_RUBXD (Nucleoside diphosphate kinase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=ndk PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.392e-31 Identity = 64/115 (55.65%), Postives = 86/115 (74.78%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 L+GEII R E KG +++ LK+M V R AE+HY + KPFFG L+E+ITS PVVAM EGEG + R ++GAT+PA++APGTIRGDLA+ N++HGSDS +SA +E+ L+F Sbjct: 17 LIGEIIRRLENKGLAIRDLKMMRVSRELAEEHYAEHREKPFFGELVEFITSAPVVAMRVEGEGAIGVVRNLMGATDPAKAAPGTIRGDLALSMPDNLVHGSDSPQSAARELRLFF 131
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_PYRFU (Nucleoside diphosphate kinase OS=Pyrococcus furiosus GN=ndk PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.042e-31 Identity = 68/135 (50.37%), Postives = 88/135 (65.19%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG---RNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIY 412 GL+GEII RFEKKG + G+K++ +DR AEKHYE+ KPFF +LI+YIT PVV M+ EG V+ R + GAT+P +APGTIRGD + G N+IH SDS ESA++EI+L+F I W Y Sbjct: 19 GLIGEIISRFEKKGLKIVGMKMIWIDRELAEKHYEEHKGKPFFEALIDYITKAPVVVMVVEGRYAVEVVRKMAGATDPKDAAPGTIRGDYGLDIGDAIYNVIHASDSKESAEREISLYFKPEEIYEYCKAADWFY 153 The following BLAST results are available for this feature:
BLAST of CX299949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299949 ID=CX299949; Name=CX299949; organism=Citrus clementina; type=EST; length=686bpback to top |