CX299949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_DEIGD (Nucleoside diphosphate kinase OS=Deinococcus geothermalis (strain DSM 11300) GN=ndk PE=3 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 7.042e-31 Identity = 62/116 (53.45%), Postives = 83/116 (71.55%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 GL EI+ R +KKG+ + GLK M + R AE+HY + +PFFG L+++ITSGPVVA+ EGE + R ++GATNPA +APGTIR D A TG N+ HGSDS ESA +E++L+F Sbjct: 16 GLTPEILARIQKKGYRVVGLKQMLISRELAERHYAEHRERPFFGELVDFITSGPVVAIALEGENAIAGWRAMMGATNPANAAPGTIRADFATTTGENVTHGSDSPESAARELSLFF 131
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_METS3 (Nucleoside diphosphate kinase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=ndk PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.197e-31 Identity = 65/120 (54.17%), Postives = 88/120 (73.33%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 L+G+I+ RFE+KG + +KLM +D A+ HY + + KPFFGSLIEYITS P +AM+ EGE + T R ++GATNP ++ GTIRGD A+ TGRNIIH SDS +SA++EI L+F + I Sbjct: 18 LMGKILSRFEEKGLQIVAVKLMQIDEDLAKTHYGEHADKPFFGSLIEYITSSPSLAMVIEGEEAISTIRKLVGATNPLEADLGTIRGDFAMDTGRNIIHASDSPDSAEREINLFFNEDEI 137
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_METBU (Nucleoside diphosphate kinase OS=Methanococcoides burtonii (strain DSM 6242) GN=ndk PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.197e-31 Identity = 63/133 (47.37%), Postives = 91/133 (68.42%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 415 LVGEI+ R EKKG + L++ + A++HY++ S +PFFGSL+ ++TSGP V+M+ EG +K R I GATNP + PGTIRGDLA+ GRN++H SD+ ESA++EI L F + I+ + + W+YE Sbjct: 17 LVGEIVSRIEKKGLKIAALRMNVMTEAAAKEHYKEHSERPFFGSLVSFVTSGPSVSMVIEGNNAIKIMRAINGATNPVDALPGTIRGDLAVDMGRNVVHASDAPESAEREIGLHFEESEISGYPRADDEWLYE 149
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_LISW6 (Nucleoside diphosphate kinase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=ndk PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.197e-31 Identity = 65/134 (48.51%), Postives = 93/134 (69.40%), Query Frame = 2 Query: 11 EGGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 409 E GL+GEI+ + EKKG L KL+ +DR AE+HY + KPFF LI +ITSGPV AM+ EG+ V+K R ++G TNP ++ GTIR + A+ T RN+IHGSDS ESA++EI L+F P ++++ ++ W+ Sbjct: 14 ERGLIGEIVAKIEKKGIKLVAGKLIQIDRKLAEQHYAEHIGKPFFEDLIGFITSGPVFAMVLEGDDVIKIARRMMGKTNPLEADAGTIRAEYAVHTNRNVIHGSDSPESAKREIQLFFEPHEILSYEKAVDIWV 147
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_MYCSS (Nucleoside diphosphate kinase OS=Mycobacterium sp. (strain MCS) GN=ndk PE=3 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.201e-30 Identity = 68/117 (58.12%), Postives = 83/117 (70.94%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 367 LVGEI+ R E+KG +L L+L TVD A +HY + KPFFGSL+E+ITSGPVVA I EG + R I G T+P + A PGTIR DLA+VT N++HGSDS ESA +EI LWFP Sbjct: 18 LVGEILGRIERKGLTLAALELKTVDDELARRHYAEHEGKPFFGSLLEFITSGPVVAAIVEGPRAIAAFRQIAGGTDPVEKATPGTIRADLALVTQDNLVHGSDSPESAAREIDLWFP 134
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_DEIRA (Nucleoside diphosphate kinase OS=Deinococcus radiodurans GN=ndk PE=3 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.569e-30 Identity = 63/121 (52.07%), Postives = 84/121 (69.42%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 GL EI+ R KG+ + GLK M + R AE+HY + +PFFG L+++IT GPVVA+ EGE + R ++GATNPA +APGTIR D A TG N+ HGSDS ESA++E+AL+F DG + Sbjct: 16 GLTPEILARIHNKGYRVVGLKQMMMPRETAEQHYGEHRERPFFGELVDFITGGPVVAIALEGENAIAGWRAMMGATNPANAAPGTIRADFATSTGENVTHGSDSPESAERELALFFGDGEL 136
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_MYCLE (Nucleoside diphosphate kinase OS=Mycobacterium leprae GN=ndk PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.049e-30 Identity = 67/120 (55.83%), Postives = 85/120 (70.83%), Query Frame = 2 Query: 11 EGGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQ-SAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 367 E L+GEII R E+KG ++ L+L V A +HY + SKPFFGSL+E+ITSGPV+A I EG V R + G T+P + +APGTIRGDLA+ T N++HGSDS SAQ+EIALWFP Sbjct: 15 ERQLIGEIISRIERKGLTIAALELRQVGEELASQHYAEHESKPFFGSLLEFITSGPVMAAIVEGPRAVAAVRQLTGGTDPVEKAAPGTIRGDLALETQFNLVHGSDSTASAQREIALWFP 134
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_MYCLB (Nucleoside diphosphate kinase OS=Mycobacterium leprae (strain Br4923) GN=ndk PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.049e-30 Identity = 67/120 (55.83%), Postives = 85/120 (70.83%), Query Frame = 2 Query: 11 EGGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQ-SAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 367 E L+GEII R E+KG ++ L+L V A +HY + SKPFFGSL+E+ITSGPV+A I EG V R + G T+P + +APGTIRGDLA+ T N++HGSDS SAQ+EIALWFP Sbjct: 15 ERQLIGEIISRIERKGLTIAALELRQVGEELASQHYAEHESKPFFGSLLEFITSGPVMAAIVEGPRAVAAVRQLTGGTDPVEKAAPGTIRGDLALETQFNLVHGSDSTASAQREIALWFP 134
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_THERP (Nucleoside diphosphate kinase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=ndk PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.676e-30 Identity = 65/132 (49.24%), Postives = 90/132 (68.18%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 409 GLVGE++ R E++G GLKLM VDR AE+HY + KPF+ L+ +ITSGPVV + EG ++ R +G T+PAQ+ PGTIRGDLA+ G+N+IHGSDS E A EI L+F D ++++ ++ WI Sbjct: 16 GLVGEVLRRLEQRGLRFVGLKLMKVDREVAERHYAEHRGKPFYEDLLAFITSGPVVVGVVEGPRAIEITRKTMGKTDPAQAEPGTIRGDLALTIGQNVIHGSDSPEKASYEIGLFFREDELVSYERAIDRWI 147
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_MYCS2 (Nucleoside diphosphate kinase OS=Mycobacterium smegmatis GN=ndk PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.495e-30 Identity = 66/117 (56.41%), Postives = 83/117 (70.94%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 367 LVGEI+ R E+KG +L L+L V A +HY + + KPFFGSL+E+ITSGP+VA I EG V R I G T+P + A PGTIRGD A++T N++HGSDS ESA +EIALWFP Sbjct: 18 LVGEILSRIERKGLTLAALELKNVSDDLARQHYAEHADKPFFGSLLEFITSGPLVAAIVEGPRAVAAFRQIAGGTDPVEKAVPGTIRGDFALITQDNLVHGSDSPESAAREIALWFP 134 The following BLAST results are available for this feature:
BLAST of CX299949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299949 ID=CX299949; Name=CX299949; organism=Citrus clementina; type=EST; length=686bpback to top |