CX299949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_SULIM (Nucleoside diphosphate kinase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=ndk PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.124e-28 Identity = 59/116 (50.86%), Postives = 83/116 (71.55%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 GL+GEII RFEK+G + LK++ + R AEK Y++ K FF L+ Y+TSGPVV M+ EG+ VV+ R +IG T+P ++ PGTIRGD A+ N+IH SDS+E AQ+E++L+F Sbjct: 18 GLIGEIISRFEKRGLKIVSLKMVKMSRDIAEKLYDEHKGKSFFEELVNYVTSGPVVCMVIEGDDVVQVIRRMIGNTDPKEAPPGTIRGDYALSKSENVIHASDSIEKAQREMSLFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_SULIL (Nucleoside diphosphate kinase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=ndk PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.124e-28 Identity = 59/116 (50.86%), Postives = 83/116 (71.55%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 GL+GEII RFEK+G + LK++ + R AEK Y++ K FF L+ Y+TSGPVV M+ EG+ VV+ R +IG T+P ++ PGTIRGD A+ N+IH SDS+E AQ+E++L+F Sbjct: 18 GLIGEIISRFEKRGLKIVSLKMVKMSRDIAEKLYDEHKGKSFFEELVNYVTSGPVVCMVIEGDDVVQVIRRMIGNTDPKEAPPGTIRGDYALSKSENVIHASDSIEKAQREMSLFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_SULIK (Nucleoside diphosphate kinase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=ndk PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.124e-28 Identity = 59/116 (50.86%), Postives = 83/116 (71.55%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 GL+GEII RFEK+G + LK++ + R AEK Y++ K FF L+ Y+TSGPVV M+ EG+ VV+ R +IG T+P ++ PGTIRGD A+ N+IH SDS+E AQ+E++L+F Sbjct: 18 GLIGEIISRFEKRGLKIVSLKMVKMSRDIAEKLYDEHKGKSFFEELVNYVTSGPVVCMVIEGDDVVQVIRRMIGNTDPKEAPPGTIRGDYALSKSENVIHASDSIEKAQREMSLFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_SULIA (Nucleoside diphosphate kinase OS=Sulfolobus islandicus (strain M.16.27) GN=ndk PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.124e-28 Identity = 59/116 (50.86%), Postives = 83/116 (71.55%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 GL+GEII RFEK+G + LK++ + R AEK Y++ K FF L+ Y+TSGPVV M+ EG+ VV+ R +IG T+P ++ PGTIRGD A+ N+IH SDS+E AQ+E++L+F Sbjct: 18 GLIGEIISRFEKRGLKIVSLKMVKMSRDIAEKLYDEHKGKSFFEELVNYVTSGPVVCMVIEGDDVVQVIRRMIGNTDPKEAPPGTIRGDYALSKSENVIHASDSIEKAQREMSLFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_PYRAB (Nucleoside diphosphate kinase OS=Pyrococcus abyssi GN=ndk PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.124e-28 Identity = 63/135 (46.67%), Postives = 85/135 (62.96%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGR---NIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIY 412 GL+GEII RFEK+G + G+K++ + + AEKHY + KPFF SL+EYIT PVV M+ EG ++ R + GAT+P + PGTIRGD A+ N++H SDS ESA++EI L+F D I W Y Sbjct: 21 GLIGEIISRFEKRGLKIVGMKMIWISKELAEKHYAEHREKPFFKSLVEYITRTPVVVMVVEGRCAIEVVRKMAGATDPKNAEPGTIRGDFALEVSDAICNVVHASDSKESAEREIKLYFRDDEIFDYPRAEDWFY 155
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_IGNH4 (Nucleoside diphosphate kinase OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=ndk PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.124e-28 Identity = 60/121 (49.59%), Postives = 84/121 (69.42%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 GLVGEII R E+KG + +K++ +DR AE+ YE+ KPFF LI Y+TSGPVVAM+ EG V+ R +IG T+ A++APGTIRGD A+ RN++H +DS E +E++++F D I Sbjct: 16 GLVGEIISRIERKGLKIVAMKMLKLDREMAERLYEEHKGKPFFDDLISYVTSGPVVAMVVEGPNAVEVMRRMIGDTDGAKAAPGTIRGDFALSKARNVVHATDSPEKVAREMSIFFRDDEI 136
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_HALSA (Nucleoside diphosphate kinase OS=Halobacterium salinarium GN=ndk PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.124e-28 Identity = 60/136 (44.12%), Postives = 83/136 (61.03%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESA--QKEIALWFPDGP-INWQSSLHPWIYE 415 GL+G+I+ R E KG + G K M +D A +HY + KPFF L+ +ITSGPV AM+WEG + R ++GAT+ +APGTIRGD G N+IHGSD + ++EIAL+F D ++W W+YE Sbjct: 20 GLIGDIVTRLETKGLKMVGGKFMRIDEELAHEHYAEHEDKPFFDGLVSFITSGPVFAMVWEGADATRQVRQLMGATDAQDAAPGTIRGDYGNDLGHNLIHGSDHEDEGANEREIALFFDDDELVDWDRDASAWVYE 155
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_HALS3 (Nucleoside diphosphate kinase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=ndk PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.124e-28 Identity = 60/136 (44.12%), Postives = 83/136 (61.03%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESA--QKEIALWFPDGP-INWQSSLHPWIYE 415 GL+G+I+ R E KG + G K M +D A +HY + KPFF L+ +ITSGPV AM+WEG + R ++GAT+ +APGTIRGD G N+IHGSD + ++EIAL+F D ++W W+YE Sbjct: 20 GLIGDIVTRLETKGLKMVGGKFMRIDEELAHEHYAEHEDKPFFDGLVSFITSGPVFAMVWEGADATRQVRQLMGATDAQDAAPGTIRGDYGNDLGHNLIHGSDHEDEGANEREIALFFDDDELVDWDRDASAWVYE 155
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_METJA (Nucleoside diphosphate kinase OS=Methanocaldococcus jannaschii GN=ndk PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.468e-28 Identity = 60/120 (50.00%), Postives = 84/120 (70.00%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 L+G+II RFE KGF + +K++ +DR AEK+YE+ K F+ LI ++TSG ++ M+ EGE + R +IG TNPA++ PGTIRGD A+ T NIIH SDS ESA++EI L+F + I Sbjct: 18 LIGKIIERFENKGFEIVAMKMIKLDREMAEKYYEEHKGKEFYERLINFMTSGRMIVMVVEGENAISVVRKMIGKTNPAEAEPGTIRGDFALTTPDNIIHASDSKESAEREIKLFFKEDEI 137
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_HALWD (Nucleoside diphosphate kinase OS=Haloquadratum walsbyi (strain DSM 16790) GN=ndk PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.468e-28 Identity = 61/136 (44.85%), Postives = 87/136 (63.97%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESA--QKEIALWFPDGPI-NWQSSLHPWIYE 415 GL+GEII RFE +G +L G K +D A HY + KPFF L+ +IT+GPV AM+WEG + R+++G T+PA+SAPGTIRGD + GRN+IH SD + ++EI L+F + + ++ PW+YE Sbjct: 23 GLIGEIISRFEDRGLTLVGGKFTRLDTEVARDHYGEHKDKPFFDDLVSFITAGPVFAMVWEGADATRQVRSMVGETDPAESAPGTIRGDYGLDLGRNVIHASDHEDEGANEREIQLFFDESELYTYERIDDPWLYE 158 The following BLAST results are available for this feature:
BLAST of CX299949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299949 ID=CX299949; Name=CX299949; organism=Citrus clementina; type=EST; length=686bpback to top |