CX299949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_HALLT (Nucleoside diphosphate kinase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=ndk PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.918e-28 Identity = 59/136 (43.38%), Postives = 88/136 (64.71%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESA--QKEIALWFPDGP-INWQSSLHPWIYE 415 GL+GEI+ RFE++G L G K M +D A +HY + KPFF L+++ITS PV AM+WEG + R+++G T+PA+SAPGTIRGD + G+N+IH SD + ++EI L+F + +++ W+YE Sbjct: 20 GLIGEIVSRFEERGLKLVGGKFMQIDEDLAHQHYGEHEGKPFFDGLVDFITSAPVFAMVWEGADATRQVRSMVGETDPAESAPGTIRGDFGLDLGQNVIHASDHEDEGANEREIDLFFDEEELVDYGLDTAAWVYE 155
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_PICTO (Nucleoside diphosphate kinase OS=Picrophilus torridus GN=ndk PE=3 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.505e-28 Identity = 60/123 (48.78%), Postives = 84/123 (68.29%), Query Frame = 2 Query: 11 EGGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 E L+GE+I RFE+KG ++K LK+M V R AE HY KPFF L+ Y+TSGP+VAMI EG + + R + GAT+ +++APGTIRGD ++ RNI+H SDS+ES + E ++F + I Sbjct: 14 ERNLIGEVISRFERKGLAIKALKMMRVTREQAEDHYSVHRLKPFFDDLVSYLTSGPIVAMIVEGNNAIASSRMLAGATDGSKAAPGTIRGDFSLDIERNIVHASDSLESYEHEYKIFFNENEI 136
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_METTH (Nucleoside diphosphate kinase OS=Methanobacterium thermoautotrophicum GN=ndk PE=3 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.505e-28 Identity = 62/133 (46.62%), Postives = 88/133 (66.17%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 415 L G II RFE +G + K++ + A +HY++ KPFF L++YITS PV+AM+ EG+ + R ++GATNPA++ GTIRGD A+ TGRNIIH SDS ESA++EI L+F + I +++ IYE Sbjct: 17 LAGRIIARFEDRGLKIVAFKMLQIPEDLAMEHYQEHREKPFFRDLVDYITSAPVIAMVIEGKDCISLIRKMVGATNPAEADLGTIRGDFALETGRNIIHASDSPESAEREIKLFFDESEICSYEMPDREMIYE 149
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_SULAC (Nucleoside diphosphate kinase OS=Sulfolobus acidocaldarius GN=ndk PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.580e-28 Identity = 61/117 (52.14%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 370 LVGEII RFEK+GF++ LK++ +DR AE+ Y++ K FF LI YI SGPVV MI EG+ V R +IGAT+P +++PGTIRGD A+ N+IH SDS E A+ E+ ++F D Sbjct: 19 LVGEIISRFEKRGFNILALKMVHMDRATAERLYQEHKGKGFFNELINYIISGPVVCMIIEGDDAVSVVRKMIGATDPKEASPGTIRGDYALSKSENVIHASDSEEKAKTEMGIFFQD 135
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_METS5 (Nucleoside diphosphate kinase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=ndk PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.580e-28 Identity = 58/120 (48.33%), Postives = 84/120 (70.00%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 L+GEI+ R E+KG + +K++ +DR A K YE+ K FF L+ YITSGPVV M+ EG+ V+ RT+IGAT+P +++PGTIRGDLA+ N+IH SD+ E A++E++L+F I Sbjct: 19 LIGEIVGRIERKGLRIAAMKMVKIDRETANKLYEEHIGKSFFNELVSYITSGPVVCMVVEGDEAVRVMRTLIGATDPKEASPGTIRGDLALSKAENVIHASDAEEKAKREMSLFFSPNEI 138
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_ENCCU (Nucleoside diphosphate kinase OS=Encephalitozoon cuniculi GN=NDK1 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.287e-28 Identity = 64/133 (48.12%), Postives = 83/133 (62.41%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDG--PINWQSSLHPWIY 412 L+ II RFE+KG L K + R E HY LSS PFF ++E + SG V+AM+W G+ V GR +IG TNP ++ GTIRGD + TG+NIIHGSD VE+A+KEI LW D P+++ WIY Sbjct: 17 LISRIIQRFEEKGLYLAASKCVIPKREVLETHYSHLSSMPFFSEMVEDMMSGMVLAMVWVGKDAVSIGRKLIGETNPQAASVGTIRGDYGVSTGKNIIHGSDCVENAEKEIKLWIGDDVQPVSFFDK--EWIY 147
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_MYCVP (Nucleoside diphosphate kinase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=ndk PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.517e-28 Identity = 62/117 (52.99%), Postives = 78/117 (66.67%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 367 L+GEII R E KG ++ L+L VD A HY + KPFF SL+E+ITSGPVVA I EG + R + G T+P + A PGTIRGDL + T N++HGSDS +SA +EI LWFP Sbjct: 18 LIGEIISRIEAKGLTVAALELKNVDDALARAHYAEHEGKPFFASLLEFITSGPVVAAILEGPRAIAAFRQLAGGTDPVEKATPGTIRGDLGLETQFNLVHGSDSPDSAAREIELWFP 134
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_HERA2 (Nucleoside diphosphate kinase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=ndk PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.517e-28 Identity = 62/134 (46.27%), Postives = 84/134 (62.69%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 415 GL+G I+ R E +G G+KL V A KHY KPFF L+ YITSGPV+ + EG+ V++ R+ +GATNP ++APGTIRGD + GRN+IH SDS E+ E+AL+F + I + S+ WI E Sbjct: 16 GLIGPILTRLEARGLKFIGIKLSQVSSELAHKHYGVHEGKPFFAGLVSYITSGPVLVVAVEGKDVIEIVRSTVGATNPVKAAPGTIRGDFGVNIGRNLIHASDSPENGDHEVALFFSSEELIRSERSVDQWITE 149
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_STRA3 (Nucleoside diphosphate kinase OS=Streptococcus agalactiae serotype III GN=ndk PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.243e-27 Identity = 57/121 (47.11%), Postives = 83/121 (68.60%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGR-----NIIHGSDSVESAQKEIALWF 364 G +GE+I R E++GFS+ L++ D ++HY +L+ +PFF +L++Y+TSGPV+ + GE V+ T RT++G+TNP + PGTIRGD A NI+HGSDS ESA +EIA+WF Sbjct: 16 GFIGEVISRIERRGFSIDRLEVRHADADILKRHYAELTDRPFFPTLVDYMTSGPVIIEVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWF 136
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_HYPBU (Nucleoside diphosphate kinase OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=ndk PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.243e-27 Identity = 62/121 (51.24%), Postives = 82/121 (67.77%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 GLVGEII RFE+KG +K LK+ + R AEK YE KPFF L+ ++TSGPVVAMI EG+ ++ R +IG T+ ++ PGTIRGD A+ G N+IH SDS ES ++E ++F D I Sbjct: 18 GLVGEIIARFERKGLKIKALKMKWLTREEAEKLYEVHRGKPFFEDLVNFVTSGPVVAMILEGDSAIEVVRLMIGPTDGRKAPPGTIRGDYALDIGANVIHASDSKESYEREYKVFFSDDEI 138 The following BLAST results are available for this feature:
BLAST of CX299949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299949 ID=CX299949; Name=CX299949; organism=Citrus clementina; type=EST; length=686bpback to top |