CX299949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_PSEHT (Nucleoside diphosphate kinase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=ndk PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.572e-22 Identity = 52/116 (44.83%), Postives = 73/116 (62.93%), Query Frame = 2 Query: 23 VGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 370 +G I RFE G + K++ + + AE Y + S +PFFG+L+ ++TSGPV+ + EGE V R I+GATNPA + GT+R D A N +HGSD+VESA +EIA +F D Sbjct: 20 IGAIYNRFETAGLKIVAAKMVHLSQEKAEGFYAEHSERPFFGALVSFMTSGPVMVTVLEGENAVLKNREIMGATNPADALAGTLRADYADSIDENAVHGSDAVESAAREIAYFFAD 135
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_CITK8 (Nucleoside diphosphate kinase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=ndk PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.572e-22 Identity = 52/120 (43.33%), Postives = 74/120 (61.67%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 ++G I RFE GF + G K++ + A Y + KPFF L+E++TSGP+V + E E V+ R ++GATNPA + GT+R D A N HGSDS+ESAQ+EIA +F +G + Sbjct: 19 VIGNIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLESENAVQRHRDLLGATNPANALAGTLRADYADSFTENGTHGSDSLESAQREIAYFFGEGEV 138
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_BORPD (Nucleoside diphosphate kinase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=ndk PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.572e-22 Identity = 48/117 (41.03%), Postives = 74/117 (63.25%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 370 ++G+II RFE G + +L + R AE+ Y +PFF L++++ SGPV + EGEG ++ R ++GAT+P ++APGTIR D A N +HGSD+ E+A E+A +FP+ Sbjct: 19 VIGQIIARFENAGLKVIAARLQQLSRADAERFYAVHKERPFFKDLVDFMVSGPVFVQVLEGEGAIQKNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSDAAETAAVEVAFFFPE 135
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_ANAMM (Nucleoside diphosphate kinase OS=Anaplasma marginale (strain St. Maries) GN=ndk PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.572e-22 Identity = 52/123 (42.28%), Postives = 77/123 (62.60%), Query Frame = 2 Query: 11 EGGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 E G++G ++ E G + ++ + AE Y ++PFF SL+ ++TSGPVV + GE VKT R ++GATNP+++APGTIRGDLA N +HGSDS+E+A+ EI +F + I Sbjct: 16 ERGIIGRVLSYIEAAGLRIVAQRMCALSHEQAEAFYAVHKARPFFPSLVGFMTSGPVVVQVLVGESAVKTYRDVMGATNPSEAAPGTIRGDLAESIDANCVHGSDSLENAEWEIKFFFKEHEI 138
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_ANAMF (Nucleoside diphosphate kinase OS=Anaplasma marginale (strain Florida) GN=ndk PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.572e-22 Identity = 52/123 (42.28%), Postives = 77/123 (62.60%), Query Frame = 2 Query: 11 EGGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 E G++G ++ E G + ++ + AE Y ++PFF SL+ ++TSGPVV + GE VKT R ++GATNP+++APGTIRGDLA N +HGSDS+E+A+ EI +F + I Sbjct: 16 ERGIIGRVLSYIEAAGLRIVAQRMCALSHEQAEAFYAVHKARPFFPSLVGFMTSGPVVVQVLVGESAVKTYRDVMGATNPSEAAPGTIRGDLAESIDANCVHGSDSLENAEWEIKFFFKEHEI 138
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_SALPC (Nucleoside diphosphate kinase OS=Salmonella paratyphi C (strain RKS4594) GN=ndk PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.054e-22 Identity = 51/120 (42.50%), Postives = 74/120 (61.67%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 ++G I RFE GF + G K++ + A Y + KPFF L+E++TSGP++ + E E V+ R ++GATNPA + GT+R D A N HGSDS+ESAQ+EIA +F +G + Sbjct: 19 VIGSIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPILVSVLESENAVQRHRDLLGATNPANALAGTLRADYADSLTENGTHGSDSLESAQREIAFFFGEGEV 138
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_SALCH (Nucleoside diphosphate kinase OS=Salmonella choleraesuis GN=ndk PE=3 SV=3) HSP 1 Score: 105.916 bits (263), Expect = 2.054e-22 Identity = 51/120 (42.50%), Postives = 74/120 (61.67%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 ++G I RFE GF + G K++ + A Y + KPFF L+E++TSGP++ + E E V+ R ++GATNPA + GT+R D A N HGSDS+ESAQ+EIA +F +G + Sbjct: 19 VIGSIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPILVSVLESENAVQRHRDLLGATNPANALAGTLRADYADSLTENGTHGSDSLESAQREIAFFFGEGEV 138
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_METPB (Nucleoside diphosphate kinase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=ndk PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.054e-22 Identity = 54/120 (45.00%), Postives = 73/120 (60.83%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 + G + E G + G + + + R AEK YE +PFFG L+E++TSGPVV + EGE V R ++GATNPAQ+A GTIR A G N +HGSDS ++A+ EIA +F D I Sbjct: 19 ITGAVNAVIEAAGLRIVGQRRIRMTRAQAEKFYEVHKERPFFGELVEFMTSGPVVVQVLEGENAVAKYREVMGATNPAQAADGTIRKQFAESVGENTVHGSDSADNAKIEIAQFFTDADI 138
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_METC4 (Nucleoside diphosphate kinase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=ndk PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.054e-22 Identity = 54/120 (45.00%), Postives = 73/120 (60.83%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 + G + E G + G + + + R AEK YE +PFFG L+E++TSGPVV + EGE V R ++GATNPAQ+A GTIR A G N +HGSDS ++A+ EIA +F D I Sbjct: 19 ITGAVNAVIEAAGLRIVGQRRIRMTREQAEKFYEVHKERPFFGELVEFMTSGPVVVQVLEGENAVAKYREVMGATNPAQAADGTIRKQFAESVGENTVHGSDSADNARLEIAQFFNDADI 138
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_HAES1 (Nucleoside diphosphate kinase OS=Haemophilus somnus (strain 129Pt) GN=ndk PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.054e-22 Identity = 53/123 (43.09%), Postives = 78/123 (63.41%), Query Frame = 2 Query: 11 EGGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 E L+G II R E KGF + +K++ +++ AE Y + S K FF LI Y+TS P+V ++ + E VK RT +G TNP + GT+R + AI +N +HGSDS+E+AQ+EIA +F + I Sbjct: 16 ERNLIGNIISRLEDKGFQIIAMKMLHLNQEQAEGFYTEHSDKAFFAELIRYMTSAPIVVLVLQKENAVKDYRTFMGTTNPEIAENGTLRYEFAINQTQNSVHGSDSLENAQREIAYFFAEAEI 138 The following BLAST results are available for this feature:
BLAST of CX299949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299949 ID=CX299949; Name=CX299949; organism=Citrus clementina; type=EST; length=686bpback to top |