CX299949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_YERPN (Nucleoside diphosphate kinase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=ndk PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.975e-22 Identity = 49/114 (42.98%), Postives = 73/114 (64.04%), Query Frame = 2 Query: 23 VGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 +G I RFE+ GF + K++ + + AE Y + +PFF L+E++TSGP++ + EGE V+ R I+GATNP + GT+R D + N +HGSD+VESAQ+EIA +F Sbjct: 20 IGAIYARFERAGFKIIAAKMLHLTKEQAEGFYAEHKGRPFFDGLVEFMTSGPIMVQVLEGENAVQRHRDIMGATNPDNALAGTLRADFSDSFTANAVHGSDAVESAQREIAYFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_YERPG (Nucleoside diphosphate kinase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=ndk PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.975e-22 Identity = 49/114 (42.98%), Postives = 73/114 (64.04%), Query Frame = 2 Query: 23 VGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 +G I RFE+ GF + K++ + + AE Y + +PFF L+E++TSGP++ + EGE V+ R I+GATNP + GT+R D + N +HGSD+VESAQ+EIA +F Sbjct: 20 IGAIYARFERAGFKIIAAKMLHLTKEQAEGFYAEHKGRPFFDGLVEFMTSGPIMVQVLEGENAVQRHRDIMGATNPDNALAGTLRADFSDSFTANAVHGSDAVESAQREIAYFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_YERPE (Nucleoside diphosphate kinase OS=Yersinia pestis GN=ndk PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.975e-22 Identity = 49/114 (42.98%), Postives = 73/114 (64.04%), Query Frame = 2 Query: 23 VGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 +G I RFE+ GF + K++ + + AE Y + +PFF L+E++TSGP++ + EGE V+ R I+GATNP + GT+R D + N +HGSD+VESAQ+EIA +F Sbjct: 20 IGAIYARFERAGFKIIAAKMLHLTKEQAEGFYAEHKGRPFFDGLVEFMTSGPIMVQVLEGENAVQRHRDIMGATNPDNALAGTLRADFSDSFTANAVHGSDAVESAQREIAYFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_YERPA (Nucleoside diphosphate kinase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=ndk PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.975e-22 Identity = 49/114 (42.98%), Postives = 73/114 (64.04%), Query Frame = 2 Query: 23 VGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 +G I RFE+ GF + K++ + + AE Y + +PFF L+E++TSGP++ + EGE V+ R I+GATNP + GT+R D + N +HGSD+VESAQ+EIA +F Sbjct: 20 IGAIYARFERAGFKIIAAKMLHLTKEQAEGFYAEHKGRPFFDGLVEFMTSGPIMVQVLEGENAVQRHRDIMGATNPDNALAGTLRADFSDSFTANAVHGSDAVESAQREIAYFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_PROMH (Nucleoside diphosphate kinase OS=Proteus mirabilis (strain HI4320) GN=ndk PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.975e-22 Identity = 50/120 (41.67%), Postives = 74/120 (61.67%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 ++G I RFE GFS+ K++ + R AE YE+ +PFF L+E++TSGP++ + EGE ++ R ++GATNP + GT+R D A N +HGSDS SA +EIA +F + I Sbjct: 19 VIGAIYNRFESAGFSIVAAKMLHLTREQAEGFYEEHKGRPFFDGLVEFMTSGPIMVQVLEGENAIQRHRDLMGATNPDNALAGTLRADYADSFTENAVHGSDSEASAAREIAYFFTENEI 138
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_METEP (Nucleoside diphosphate kinase OS=Methylobacterium extorquens (strain PA1) GN=ndk PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.975e-22 Identity = 53/120 (44.17%), Postives = 73/120 (60.83%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 + G + E G + G + + + R AEK YE +PFFG L+E++TSGPVV + EGE V R ++GATNPAQ+A GTIR A G N +HGSDS ++A+ EIA +F + I Sbjct: 19 ITGAVNAVIEAAGLRIVGQRRIRMTREQAEKFYEVHKERPFFGELVEFMTSGPVVVQVLEGENAVAKYREVMGATNPAQAADGTIRKQFAESVGENTVHGSDSADNARLEIAQFFNEADI 138
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_BDEBA (Nucleoside diphosphate kinase OS=Bdellovibrio bacteriovorus GN=ndk PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.975e-22 Identity = 48/114 (42.11%), Postives = 72/114 (63.16%), Query Frame = 2 Query: 23 VGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 +G+I+ FE G + K+ + AE+ Y + ++PFFG L+ ++TSGPV+ M +GEG V R I+GAT+P ++ PGT+R G N +HGSDS ESA +E+AL+F Sbjct: 20 IGDIVSMFEANGLKIAAAKITVLTTAKAEEFYAEHKARPFFGELVSFMTSGPVMLMCLQGEGAVLKNREIMGATDPKKANPGTVRAKFGDNVGENAVHGSDSPESAARELALFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_SHEPA (Nucleoside diphosphate kinase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=ndk PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.804e-22 Identity = 51/114 (44.74%), Postives = 72/114 (63.16%), Query Frame = 2 Query: 23 VGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 +G I RFE G + K++ + + AE Y + S +PFFG+L+ ++TSGP++ EGE V R I+GATNPA++A GTIR D A N HGSDSV SA++E+A +F Sbjct: 20 IGAIYNRFETAGLKIIASKMIHLSKEQAEGFYAEHSERPFFGALVAFMTSGPIMVQTLEGENAVLAHREILGATNPAEAAEGTIRADFAESIDENAAHGSDSVASAEREVAYFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_SHEHH (Nucleoside diphosphate kinase OS=Shewanella halifaxensis (strain HAW-EB4) GN=ndk PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.804e-22 Identity = 52/114 (45.61%), Postives = 72/114 (63.16%), Query Frame = 2 Query: 23 VGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 +G I RFE G + K++ + + AE Y + S +PFFG+L+ ++TSGP++ EGE V R I+GATNPA++A GTIR D A N HGSDSV SA++EIA +F Sbjct: 20 IGAIYNRFETAGLKIIASKMVHLSQEQAEGFYAEHSERPFFGALVAFMTSGPIMVQTLEGENAVLAHREILGATNPAEAAEGTIRADFAESIDENAAHGSDSVASAEREIAYFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_METSB (Nucleoside diphosphate kinase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=ndk PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.804e-22 Identity = 53/120 (44.17%), Postives = 72/120 (60.00%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 L G I EK G + K + + RP AE Y +PFFG+L++ + SGPVV + EGE +K R ++GAT+PA++APGTIR + A+ G N HGSD+ E+A EIA WF I Sbjct: 19 LTGAINALIEKAGLRIIAQKRVQITRPQAETFYAVHKERPFFGALVDTMISGPVVVQVLEGENAIKAYRDVLGATDPAKAAPGTIRKEFALSVGENSGHGSDASETAAIEIAQWFSGNEI 138 The following BLAST results are available for this feature:
BLAST of CX299949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299949 ID=CX299949; Name=CX299949; organism=Citrus clementina; type=EST; length=686bpback to top |