CX299949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_COXBN (Nucleoside diphosphate kinase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=ndk PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.804e-22 Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PD 370 ++G+I RFEK G + K+ + +P AEK Y +PF+ L++++T GPV+ + EGE + R I+GATNP ++ PGTIR D A N +HGSD E+A++EIA +F PD Sbjct: 19 VIGQIYSRFEKAGLKIIAAKMCHLSKPQAEKFYAVHKDRPFYPDLVKFMTQGPVMIQVLEGENAIVKNREIMGATNPKEALPGTIRADFADSIDANAVHGSDGPETAKEEIAFFFKPD 136
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_COXB1 (Nucleoside diphosphate kinase OS=Coxiella burnetii (strain CbuK_Q154) GN=ndk PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.804e-22 Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PD 370 ++G+I RFEK G + K+ + +P AEK Y +PF+ L++++T GPV+ + EGE + R I+GATNP ++ PGTIR D A N +HGSD E+A++EIA +F PD Sbjct: 19 VIGQIYSRFEKAGLKIISAKMCHLSKPQAEKFYAVHKDRPFYPDLVKFMTQGPVMIQVLEGENAIVKNREIMGATNPKEALPGTIRADFADSIDANAVHGSDGPETAKEEIAFFFKPD 136
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_SHEPW (Nucleoside diphosphate kinase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=ndk PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21 Identity = 51/114 (44.74%), Postives = 72/114 (63.16%), Query Frame = 2 Query: 23 VGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 +G I RFE G + K++ + + AE Y + S +PFFG+L+ ++TSGP++ EGE V R I+GATNPA++A GTIR D A N HGSDSV SA++E+A +F Sbjct: 20 IGAIYNRFETAGLKIIASKMVHLSQEQAEGFYAEHSERPFFGALVAFMTSGPIMVQTLEGENAVLAHREILGATNPAEAAEGTIRADFAESIDENAAHGSDSVASAEREVAYFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_PSEU5 (Nucleoside diphosphate kinase OS=Pseudomonas stutzeri (strain A1501) GN=ndk PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21 Identity = 50/115 (43.48%), Postives = 71/115 (61.74%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 ++GEI RFEK G + K++ + A Y + S + FF L+ ++TSGPV+ + EGE V R ++GATNP ++APGTIR D A+ N +HGSDS SA +EIA +F Sbjct: 19 VIGEITTRFEKAGLRVVASKMVQLSEREAAGFYAEHSERGFFKDLVAFMTSGPVIVQVLEGENAVAKNRELMGATNPKEAAPGTIRADFAVSIDENAVHGSDSEASAAREIAYFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_PSEE4 (Nucleoside diphosphate kinase OS=Pseudomonas entomophila (strain L48) GN=ndk PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21 Identity = 49/115 (42.61%), Postives = 73/115 (63.48%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 ++G+I RFE+ G + K+ + + AE Y + S++ FFG L+ ++TSGPVV + EGE + R ++GATNP ++APGTIR D A N +HGSDS +A +EIA +F Sbjct: 19 VIGKITTRFEEAGLKIVASKIKQLSKAEAEGFYAEHSARGFFGDLVAFMTSGPVVVQVLEGENAIALNRELMGATNPKEAAPGTIRADFAESIDANAVHGSDSEAAAAREIAYFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_HAES2 (Nucleoside diphosphate kinase OS=Haemophilus somnus (strain 2336) GN=ndk PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21 Identity = 51/123 (41.46%), Postives = 79/123 (64.23%), Query Frame = 2 Query: 11 EGGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 E L+G II R E KGF + +K++ +++ AE Y + +K FF L++Y+TS P+V ++ + E VK RT +G TNP + GT+R + AI +N +HGSDS+E+AQ+EIA +F + I Sbjct: 16 ERNLIGNIISRLEDKGFQIIAMKMLHLNQEQAEGFYAEHRNKAFFTELVKYMTSAPIVVLVLQKENAVKDYRTFMGTTNPEIAENGTLRYEFAINQTQNSVHGSDSLENAQREIAYFFAEAEI 138
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_CHLAB (Nucleoside diphosphate kinase OS=Chlamydophila abortus GN=ndk PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21 Identity = 52/114 (45.61%), Postives = 71/114 (62.28%), Query Frame = 2 Query: 23 VGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 +GEII FEK GF + +K++ + AE Y S+PFF L++++ SGPVV M+ EG V R I+GATNP ++APGTIR G N +HGSDS+E+A EI +F Sbjct: 18 IGEIIAIFEKSGFRIAAMKMLHLSVKEAEGFYAVHKSRPFFQELVDFMISGPVVVMVLEGNNAVARNREIMGATNPQEAAPGTIRAQFGESIGINAVHGSDSLENAAIEINYFF 131
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_BORA1 (Nucleoside diphosphate kinase OS=Bordetella avium (strain 197N) GN=ndk PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21 Identity = 46/117 (39.32%), Postives = 74/117 (63.25%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 370 ++G+I+ RFE+ G + +L + R AE+ Y +PFF L++++ SGPV + EGE ++ R ++GAT+P ++APGTIR D A N +HGSD+ E+A E+A +FP+ Sbjct: 19 VIGQIVARFEQAGLKVIAARLQQLSRADAERFYAVHKERPFFKDLVDFMVSGPVFVQVLEGENAIQVNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSDAPETAAVEVAFFFPE 135
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_METCA (Nucleoside diphosphate kinase OS=Methylococcus capsulatus GN=ndk PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.331e-21 Identity = 49/115 (42.61%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 ++GEI RFEK G + K+ + R AE Y +PFF L+ ++ SGPV+ + EGE + R ++GATNP +APGTIR D A+ N +HGSD E+A +EIA +F Sbjct: 19 VIGEIYSRFEKAGLRIVAAKMAQLSREQAEGFYAVHRERPFFNDLVSFMISGPVMIQVLEGENAIAKNRELMGATNPRDAAPGTIRADFAVSIDENAVHGSDGPETAAQEIAYFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_CAMC5 (Nucleoside diphosphate kinase OS=Campylobacter curvus (strain 525.92) GN=ndk PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.331e-21 Identity = 52/115 (45.22%), Postives = 72/115 (62.61%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 +VG+II RFE G + K + + + A+ Y S +PFF L+E++TSGPVV M+ EGE V R ++GATNP ++A GTIR D A N +HGSDS+E+A EI +F Sbjct: 17 VVGKIIDRFESNGLRIAAAKKVKLSKCDAKAFYAVHSERPFFNDLVEFMTSGPVVVMVLEGENAVAKNRELMGATNPKEAAAGTIRADFAESIDANAVHGSDSLENAINEINFFF 131 The following BLAST results are available for this feature:
BLAST of CX299949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299949 ID=CX299949; Name=CX299949; organism=Citrus clementina; type=EST; length=686bpback to top |