CX299949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_RHOCS (Nucleoside diphosphate kinase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=ndk PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.739e-21 Identity = 53/115 (46.09%), Postives = 72/115 (62.61%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 L G+I RFE+ G + K + + R AE+ Y + +PF+G L+ ++ SGPVV + EGE V R I+GATNPA +APGTIR D A N +HGSDS+E+A EIA +F Sbjct: 19 LTGKINARFEEAGLRIVAQKRIRLTREQAEQFYIVHAERPFYGELVSFMISGPVVVQVLEGENAVARNREIMGATNPANAAPGTIRKDFAESIEANSVHGSDSLENAATEIAYFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_PSEPF (Nucleoside diphosphate kinase OS=Pseudomonas fluorescens (strain Pf0-1) GN=ndk PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.739e-21 Identity = 50/115 (43.48%), Postives = 72/115 (62.61%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 ++G+I RFE G + KL + + AE Y + S++ FFG L+ ++TSGPVV + EGE + R ++GATNP ++APGTIR D A N +HGSDS +A +EIA +F Sbjct: 19 VIGKITTRFEDAGLRVVASKLKQLSKAEAEGFYAEHSARGFFGELVAFMTSGPVVVQVLEGENAIARNRELMGATNPKEAAPGTIRADFAESIDANAVHGSDSEAAAAREIAYFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_PSEMY (Nucleoside diphosphate kinase OS=Pseudomonas mendocina (strain ymp) GN=ndk PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.739e-21 Identity = 50/115 (43.48%), Postives = 71/115 (61.74%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 ++GEI RFEK G + K++ + A Y + S + FF L+ ++TSGPV+ + EGE V R ++GATNP ++APGTIR D A+ N +HGSDS SA +EIA +F Sbjct: 19 VIGEITTRFEKAGLRVVASKMVQLSEREAAGFYAEHSERGFFKDLVAFMTSGPVIVQVLEGEDAVLKNRELMGATNPKEAAPGTIRADFAVSIDENAVHGSDSEASAAREIAYFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_HAHCH (Nucleoside diphosphate kinase OS=Hahella chejuensis (strain KCTC 2396) GN=ndk PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.739e-21 Identity = 49/120 (40.83%), Postives = 72/120 (60.00%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 ++GEI RFEK G + K++ + + AE Y + + FF L+ ++TSGPVV EGE + R ++GATNP ++ PGTIR D A N +HGSDS SA++E+A +F + I Sbjct: 19 VIGEIYSRFEKAGLRIVAAKMLHLSQEQAEGFYAEHKERGFFPDLVAFMTSGPVVVQALEGENAIALNRQLMGATNPKEAEPGTIRADFASSIDANAVHGSDSAASAEREVAYFFSENEI 138
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_FERNB (Nucleoside diphosphate kinase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=ndk PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.739e-21 Identity = 50/121 (41.32%), Postives = 79/121 (65.29%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 GLVGEI+ RFE++G + GLK + + R AEK YE K F+ L+E++ SGP+VA+I E ++ R I+GAT+P ++ G+IRG+ A+ +N+IH SDS ++ +E +++F I Sbjct: 16 GLVGEILKRFEQRGIKIVGLKFLKMTREQAEKLYEPHKGKQFYDELLEFMLSGPIVAVILEAPRCLELVRHIVGATDPLKAEAGSIRGEFALTVTKNLIHASDSTDNFIRESSIFFSPSEI 136
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_CAMJE (Nucleoside diphosphate kinase OS=Campylobacter jejuni GN=ndk PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.739e-21 Identity = 51/121 (42.15%), Postives = 73/121 (60.33%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 G++G+I+ RFE G + +K + + + AE Y +PFF L+E++ SGPVV I EGEG V R ++GATNP ++ GTIR D A N +HGSDS+E+A+ EI +F I Sbjct: 16 GVIGKILDRFESNGLRIAAMKKVQLSKEQAENFYAVHKERPFFKDLVEFMISGPVVVSILEGEGAVLKNRDLMGATNPKEAKAGTIRADFAESIDANAVHGSDSLENAKIEIEFFFKPNEI 136
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_BORPE (Nucleoside diphosphate kinase OS=Bordetella pertussis GN=ndk PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.739e-21 Identity = 46/117 (39.32%), Postives = 74/117 (63.25%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 370 +VG+I+ RFE+ G + ++ + R AE+ Y +PFF L++++ SGPV + EGE ++ R ++GAT+P ++APGTIR D A N +HGSD+ E+A E+A +FP+ Sbjct: 19 VVGQIVARFEQAGLKVIAARMQQLSRTDAERFYAVHKERPFFKDLVDFMVSGPVFVQVLEGESAIQKNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSDAPETAAVEVAFFFPE 135
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_BORPA (Nucleoside diphosphate kinase OS=Bordetella parapertussis GN=ndk PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.739e-21 Identity = 46/117 (39.32%), Postives = 74/117 (63.25%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 370 +VG+I+ RFE+ G + ++ + R AE+ Y +PFF L++++ SGPV + EGE ++ R ++GAT+P ++APGTIR D A N +HGSD+ E+A E+A +FP+ Sbjct: 19 VVGQIVARFEQAGLKVIAARMQQLSRTDAERFYAVHKERPFFKDLVDFMVSGPVFVQVLEGESAIQKNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSDAPETAAVEVAFFFPE 135
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_BORBR (Nucleoside diphosphate kinase OS=Bordetella bronchiseptica GN=ndk PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.739e-21 Identity = 46/117 (39.32%), Postives = 74/117 (63.25%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 370 +VG+I+ RFE+ G + ++ + R AE+ Y +PFF L++++ SGPV + EGE ++ R ++GAT+P ++APGTIR D A N +HGSD+ E+A E+A +FP+ Sbjct: 19 VVGQIVARFEQAGLKVIAARMQQLSRTDAERFYAVHKERPFFKDLVDFMVSGPVFVQVLEGESAIQKNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSDAPETAAVEVAFFFPE 135
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_PHOPR (Nucleoside diphosphate kinase OS=Photobacterium profundum GN=ndk PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.271e-21 Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 L+G I RFE G + K++ +D A+ Y + KPFF L+E++TSGPV+ + EGE + R ++G TNP +A GTIR D A+ N +HGSDS ESA +EIA +F + I Sbjct: 19 LIGAIYQRFENAGLKIVASKMVHLDATKAQGFYAEHEEKPFFNELVEFMTSGPVMVQVLEGEDAIHRYRELMGTTNPENAACGTIRSDFALSMRYNSVHGSDSPESAAREIAYFFTEDEI 138 The following BLAST results are available for this feature:
BLAST of CX299949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299949 ID=CX299949; Name=CX299949; organism=Citrus clementina; type=EST; length=686bpback to top |