CX299949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_CAMJJ (Nucleoside diphosphate kinase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=ndk PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.271e-21 Identity = 50/121 (41.32%), Postives = 73/121 (60.33%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 G++G+I+ RFE G + +K + + + AE Y +PFF L+E++ SGPVV + EGEG V R ++GATNP ++ GTIR D A N +HGSDS+E+A+ EI +F I Sbjct: 16 GVIGKILDRFESNGLRIAAMKKVQLSKEQAENFYAVHKERPFFKDLVEFMISGPVVVSVLEGEGAVLKNRDLMGATNPKEAKAGTIRADFAESIDANAVHGSDSLENAKIEIEFFFKPNEI 136
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_CAMJD (Nucleoside diphosphate kinase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=ndk PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.271e-21 Identity = 50/121 (41.32%), Postives = 73/121 (60.33%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 G++G+I+ RFE G + +K + + + AE Y +PFF L+E++ SGPVV + EGEG V R ++GATNP ++ GTIR D A N +HGSDS+E+A+ EI +F I Sbjct: 16 GVIGKILDRFESNGLRIAAMKKVQLSKEQAENFYAVHKERPFFKDLVEFMISGPVVVSVLEGEGAVLKNRDLMGATNPKEAKAGTIRADFAESIDANAVHGSDSLENAKIEIEFFFKPNEI 136
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_VIBSL (Nucleoside diphosphate kinase OS=Vibrio splendidus (strain LGP32) GN=ndk PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 52/120 (43.33%), Postives = 72/120 (60.00%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 LVGEI R EK G + K++++ A Y + K FFG L E++TSGP++ + EGE + R ++G TNP ++A GTIR D AI N +HGSDS ESA +EI +FP+ I Sbjct: 19 LVGEIYHRIEKAGLQIIAAKMVSLTEAQASGFYAEHEGKEFFGPLKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAACGTIRADYAISMRYNSVHGSDSPESAAREIEFFFPESEI 138
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_VIBHB (Nucleoside diphosphate kinase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=ndk PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 51/123 (41.46%), Postives = 73/123 (59.35%), Query Frame = 2 Query: 11 EGGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 E L+GEI R EK G + K++ + A Y + KPFF +L E++TSGP++ + EGE + R ++G TNP ++A GTIR D A+ N +HGSDS ESA +EI +FP+ I Sbjct: 16 ERNLIGEIYHRIEKAGLRIVAAKMVHLTEEQASGFYAEHEGKPFFPALKEFMTSGPIMVQVLEGEDAIARYRELMGKTNPEEAACGTIRADYALSMRHNSVHGSDSPESAAREIEFFFPESEI 138
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_CAMJR (Nucleoside diphosphate kinase OS=Campylobacter jejuni (strain RM1221) GN=ndk PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 50/121 (41.32%), Postives = 73/121 (60.33%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 G++G+I+ RFE G + +K + + + AE Y +PFF L+E++ SGPVV + EGEG V R ++GATNP ++ GTIR D A N +HGSDS+E+A+ EI +F I Sbjct: 16 GVIGKILDRFESNGLRIAAMKKVQLSKEQAENFYAVHKERPFFKDLVEFMISGPVVVSVLEGEGAVLKNRDLMGATNPKEAKAGTIRADFAESIDANAVHGSDSLENAKIEIDFFFKPNEI 136
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_CAMJ8 (Nucleoside diphosphate kinase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=ndk PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 50/121 (41.32%), Postives = 73/121 (60.33%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 G++G+I+ RFE G + +K + + + AE Y +PFF L+E++ SGPVV + EGEG V R ++GATNP ++ GTIR D A N +HGSDS+E+A+ EI +F I Sbjct: 16 GVIGKILDRFESNGLRIAAMKKVQLSKEQAENFYAVHKERPFFKDLVEFMISGPVVVSVLEGEGAVLKNRDLMGATNPKEAKAGTIRADFAESIDANAVHGSDSLENAKIEIDFFFKPNEI 136
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_CAMC1 (Nucleoside diphosphate kinase OS=Campylobacter concisus (strain 13826) GN=ndk PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 50/115 (43.48%), Postives = 71/115 (61.74%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 +VG+II RFE G + K + + + A+ Y +PFF L++++ SGPVV M+ EGE V R ++GATNP ++APGTIR D A N +HGSDS+E+A EI +F Sbjct: 17 VVGKIIDRFESNGLRIAAAKKIKLSKCDAKAFYAVHKDRPFFNDLVDFMVSGPVVVMVLEGENAVAKNRELMGATNPKEAAPGTIRADFADSIDANAVHGSDSLENAVNEINFFF 131
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_XANOR (Nucleoside diphosphate kinase OS=Xanthomonas oryzae pv. oryzae GN=ndk PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.873e-21 Identity = 52/115 (45.22%), Postives = 68/115 (59.13%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 ++GEI RFEK G + K + R AE Y +PFF +L+E++ SGPV+ EGE V R ++GATNP +APGTIR D A N HGSDSVE+A E+A +F Sbjct: 19 VIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_XANOM (Nucleoside diphosphate kinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ndk PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.873e-21 Identity = 52/115 (45.22%), Postives = 68/115 (59.13%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 ++GEI RFEK G + K + R AE Y +PFF +L+E++ SGPV+ EGE V R ++GATNP +APGTIR D A N HGSDSVE+A E+A +F Sbjct: 19 VIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_XANCP (Nucleoside diphosphate kinase OS=Xanthomonas campestris pv. campestris GN=ndk PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.873e-21 Identity = 52/115 (45.22%), Postives = 68/115 (59.13%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 ++GEI RFEK G + K + R AE Y +PFF +L+E++ SGPV+ EGE V R ++GATNP +APGTIR D A N HGSDSVE+A E+A +F Sbjct: 19 VIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133 The following BLAST results are available for this feature:
BLAST of CX299949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299949 ID=CX299949; Name=CX299949; organism=Citrus clementina; type=EST; length=686bpback to top |