CX299949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_CHLFF (Nucleoside diphosphate kinase OS=Chlamydophila felis (strain Fe/C-56) GN=ndk PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.873e-21 Identity = 50/114 (43.86%), Postives = 72/114 (63.16%), Query Frame = 2 Query: 23 VGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 +GEI+ FEK GF + +K++ + AE Y S+PFF L++++ SGPVV M+ EG+ V R I+GATNP ++A GTIR G N +HGSDS+E+A EI+ +F Sbjct: 18 IGEIVAIFEKAGFRIAAMKMVHLSAKEAEGFYAVHKSRPFFQELVDFMISGPVVVMVLEGDNAVVRNREIMGATNPQEAAQGTIRAQFGESIGINAVHGSDSLENAAIEISYFF 131
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_AGRT5 (Nucleoside diphosphate kinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ndk PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.873e-21 Identity = 52/120 (43.33%), Postives = 70/120 (58.33%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 L G I FE G + K + + + AE Y +PFFG L+E +TSGP + + EGE + R I+GATNPAQ+A GTIR A+ G N +HGSD+ E+A +EIA WF + I Sbjct: 19 LTGAITKVFEDNGLRIVASKRVWMSKREAEGFYAVHKERPFFGELVEGMTSGPTIVQVLEGENAILKNREIMGATNPAQAAEGTIRKSFALSIGENSVHGSDAPETAAQEIAYWFAETEI 138
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK1_PARUW (Nucleoside diphosphate kinase 1 OS=Protochlamydia amoebophila (strain UWE25) GN=ndk1 PE=3 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 3.873e-21 Identity = 47/121 (38.84%), Postives = 75/121 (61.98%), Query Frame = 2 Query: 11 EGGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PD 370 + +GEII RFE+ G + +K+ T+ + A K Y +PF+ L+ +++SGPVV M+ EG + R ++GAT+P ++ GT+R D A RN +HGSDS E+A++E+ +F PD Sbjct: 16 QNNYIGEIISRFEQAGLKIAAIKMTTLTKDQASKFYAIHKDRPFYNDLVNFMSSGPVVVMVLEGNQAIAKNRELMGATDPKKAEKGTLRADFAESMSRNAVHGSDSSETAEEEVLFFFKPD 136
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_ARCB4 (Nucleoside diphosphate kinase OS=Arcobacter butzleri (strain RM4018) GN=ndk PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21 Identity = 49/115 (42.61%), Postives = 73/115 (63.48%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 +VG+I+ RFE G + K + + + AE Y +++PFF L+E++ SGPVV + EGE + R ++GATNP ++A GTIR D A N +HGSDS+E+A+ EIA +F Sbjct: 17 VVGKILDRFESAGLKIAATKKLQLSQADAEAFYAVHAARPFFKDLVEFMISGPVVVSVLEGENAMAKNRELMGATNPKEAAAGTIRADFADSIDANAVHGSDSLENAKNEIAFFF 131
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_ACISJ (Nucleoside diphosphate kinase OS=Acidovorax sp. (strain JS42) GN=ndk PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21 Identity = 47/116 (40.52%), Postives = 72/116 (62.07%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 367 ++G+I RFE G + +++ + R AE+ Y +PFF L++++ SGPV+ EGE V R ++GAT+P ++APGTIR D A N +HGSD+ E+AQ E+A +FP Sbjct: 19 VIGQIYARFEAAGLKIAAARMIHLSRAEAEQFYAVHKERPFFKDLVDFMISGPVMVQALEGENAVLKNRELMGATDPKKAAPGTIRADFADSIDANAVHGSDAAETAQVEVAFFFP 134
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_WOLWR (Nucleoside diphosphate kinase OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=ndk PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21 Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = 2 Query: 11 EGGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 370 + + G+I E G + K+M + + AE YE +PFFG L+E++TSG V+ + GE V R I+GATNP Q+ GTIRGD A N +HGSDS+E+A+KEIA +F + Sbjct: 16 KNNITGKINSYIESSGLKIIAQKMMLLTKKQAELFYEIHKDRPFFGELVEFMTSGSVIVQVLVGENAVSKYRQIMGATNPKQADKGTIRGDFADDISENRVHGSDSLENARKEIAFFFAE 135
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_SULNB (Nucleoside diphosphate kinase OS=Sulfurovum sp. (strain NBC37-1) GN=ndk PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21 Identity = 49/115 (42.61%), Postives = 71/115 (61.74%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 ++G+I+ RFE G + K + R AE Y + +PFF L++++ SGPVV + EGE + R ++GATNPA++ PGTIR D A N +HGSDSVE+A+ EI +F Sbjct: 17 VIGQILARFEAAGLRIAATKKTRLSRVDAEAFYAIHAERPFFKDLVDFMISGPVVVTVLEGENAMAKNRELMGATNPAEAEPGTIRADFADSIDANAVHGSDSVENAEIEINFFF 131
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_DIAST (Nucleoside diphosphate kinase OS=Diaphorobacter sp. (strain TPSY) GN=ndk PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21 Identity = 47/116 (40.52%), Postives = 72/116 (62.07%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 367 ++G+I RFE G + +++ + R AE+ Y +PFF L++++ SGPV+ EGE V R ++GAT+P ++APGTIR D A N +HGSD+ E+AQ E+A +FP Sbjct: 19 VIGQIYARFEAAGLKIVAARMIHLSRAEAEQFYAVHKERPFFKDLVDFMISGPVMVQALEGENAVLKNRELMGATDPKKAAPGTIRADFADSIDANAVHGSDAAETAQVEVAFFFP 134
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_DESAH (Nucleoside diphosphate kinase OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=ndk PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21 Identity = 48/117 (41.03%), Postives = 75/117 (64.10%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 370 L+GE++ RF+ +G + LK+M + + A+ Y +PFF SL E++TSGP+V M+ EG+ V+ R ++GATN ++ GTIR D A +N++HGSD+ E+A EI +F D Sbjct: 17 LIGEVVKRFQDQGIHIAALKMMQLTQKQAQGFYAVHRERPFFNSLTEFMTSGPIVVMVLEGDDVIAKNRKLMGATNFKEAEEGTIRRDFATDIEKNVVHGSDAPETAAFEIGYFFND 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_BRUSU (Nucleoside diphosphate kinase OS=Brucella suis GN=ndk PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21 Identity = 49/115 (42.61%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 L G II + E+ G + K + + R AE Y +PFFG L+E+++SGP V + EGE + R ++GATNPA + GTIR A+ G N +HGSD+ E+A +EIA WF Sbjct: 19 LTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWF 133 The following BLAST results are available for this feature:
BLAST of CX299949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299949 ID=CX299949; Name=CX299949; organism=Citrus clementina; type=EST; length=686bpback to top |