CX299949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_BRUSI (Nucleoside diphosphate kinase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=ndk PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21 Identity = 49/115 (42.61%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 L G II + E+ G + K + + R AE Y +PFFG L+E+++SGP V + EGE + R ++GATNPA + GTIR A+ G N +HGSD+ E+A +EIA WF Sbjct: 19 LTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_BRUO2 (Nucleoside diphosphate kinase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=ndk PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21 Identity = 49/115 (42.61%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 L G II + E+ G + K + + R AE Y +PFFG L+E+++SGP V + EGE + R ++GATNPA + GTIR A+ G N +HGSD+ E+A +EIA WF Sbjct: 19 LTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYTVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_BRUMB (Nucleoside diphosphate kinase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=ndk PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21 Identity = 49/115 (42.61%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 L G II + E+ G + K + + R AE Y +PFFG L+E+++SGP V + EGE + R ++GATNPA + GTIR A+ G N +HGSD+ E+A +EIA WF Sbjct: 19 LTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_BRUC2 (Nucleoside diphosphate kinase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=ndk PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21 Identity = 49/115 (42.61%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 L G II + E+ G + K + + R AE Y +PFFG L+E+++SGP V + EGE + R ++GATNPA + GTIR A+ G N +HGSD+ E+A +EIA WF Sbjct: 19 LTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_BRUAB (Nucleoside diphosphate kinase OS=Brucella abortus GN=ndk PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21 Identity = 49/115 (42.61%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 L G II + E+ G + K + + R AE Y +PFFG L+E+++SGP V + EGE + R ++GATNPA + GTIR A+ G N +HGSD+ E+A +EIA WF Sbjct: 19 LTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_BRUA2 (Nucleoside diphosphate kinase OS=Brucella abortus (strain 2308) GN=ndk PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21 Identity = 49/115 (42.61%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 L G II + E+ G + K + + R AE Y +PFFG L+E+++SGP V + EGE + R ++GATNPA + GTIR A+ G N +HGSD+ E+A +EIA WF Sbjct: 19 LTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_BRUA1 (Nucleoside diphosphate kinase OS=Brucella abortus (strain S19) GN=ndk PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21 Identity = 49/115 (42.61%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 L G II + E+ G + K + + R AE Y +PFFG L+E+++SGP V + EGE + R ++GATNPA + GTIR A+ G N +HGSD+ E+A +EIA WF Sbjct: 19 LTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_RHORT (Nucleoside diphosphate kinase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=ndk PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21 Identity = 54/115 (46.96%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 L G I RFE+ G + G K + + AE YE + FFGSL+E++TSGPVV + EGE V R ++GATNPA +A TIR D A N +HGSDS E+A EIA +F Sbjct: 19 LTGAINARFEEAGLRIVGQKRLRLTTAQAEGFYEVHKERSFFGSLVEFMTSGPVVVQVLEGENAVLKNREVMGATNPANAAEHTIRKDFAESIEANSVHGSDSAENAAHEIAYFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_PSEPG (Nucleoside diphosphate kinase OS=Pseudomonas putida (strain GB-1) GN=ndk PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21 Identity = 48/115 (41.74%), Postives = 72/115 (62.61%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 ++G+I RFE+ G + K+ + + AE Y + S++ FFG L+ ++TSGPVV + EGE + R ++GATNP ++A GTIR D A N +HGSDS +A +EIA +F Sbjct: 19 VIGKITTRFEEAGLKIVASKIKQLSKAEAEGFYAEHSARGFFGDLVAFMTSGPVVVQVLEGENAIALNRELMGATNPKEAAAGTIRADFAESIDANAVHGSDSEAAAAREIAYFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_PSEFS (Nucleoside diphosphate kinase OS=Pseudomonas fluorescens (strain SBW25) GN=ndk PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21 Identity = 49/115 (42.61%), Postives = 71/115 (61.74%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 ++GEI RFEK G + KL + + AE Y + S++ FFG L+ ++ SGPVV + EGE + R ++GATNP ++A GTIR D A N +HGSDS +A +EI+ +F Sbjct: 19 VIGEITTRFEKAGLKVVASKLKQLSKAEAEGFYAEHSARGFFGDLVAFMISGPVVVQVLEGENAIALNRELMGATNPKEAAAGTIRADFAESIDANAVHGSDSEAAAAREISYFF 133 The following BLAST results are available for this feature:
BLAST of CX299949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299949 ID=CX299949; Name=CX299949; organism=Citrus clementina; type=EST; length=686bpback to top |