CX299949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_PSE14 (Nucleoside diphosphate kinase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ndk PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.127e-20 Identity = 49/115 (42.61%), Postives = 71/115 (61.74%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 ++GEI RFEK G + KL + + AE Y + S++ FFG L+ ++ SGPVV + EGE + R ++GATNP ++A GTIR D A N +HGSDS +A +EI+ +F Sbjct: 19 VIGEITTRFEKAGLRVVASKLKQLSKAEAEGFYAEHSARGFFGDLVAFMISGPVVVQVLEGENAIALNRELMGATNPKEAAAGTIRADFADSIDANAVHGSDSEAAAAREISYFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_HELHP (Nucleoside diphosphate kinase OS=Helicobacter hepaticus GN=ndk PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.127e-20 Identity = 49/116 (42.24%), Postives = 71/116 (61.21%), Query Frame = 2 Query: 17 GLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 G++G+II RFE + +K + + R AE Y +PFF L++++ SGPVV M+ EG V R ++GATNP ++ GTIR D A N +HGSDS+E+A+ EIA +F Sbjct: 16 GVIGKIIDRFESNNLRICAMKKLQLTRCDAEAFYAIHKERPFFKDLVDFMISGPVVVMVLEGNNAVMKNRDLMGATNPKEAEAGTIRADFAQSIDANAVHGSDSLENAKNEIAFFF 131
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_CHLCV (Nucleoside diphosphate kinase OS=Chlamydophila caviae GN=ndk PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.127e-20 Identity = 50/114 (43.86%), Postives = 71/114 (62.28%), Query Frame = 2 Query: 23 VGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 +GEI+ FEK GF + +K++ + AE Y S+PFF L++++ SGPVV M+ EG+ V R I+GATNP ++A GTIR G N +HGSDS+E+A EI +F Sbjct: 18 IGEIVAIFEKSGFRIAAMKMVHLSVKEAEGFYAVHKSRPFFQELVDFMISGPVVVMVLEGDNAVVRNREIMGATNPQEAAQGTIRAQFGESIGINAVHGSDSLENAAIEINYFF 131
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_ALISL (Nucleoside diphosphate kinase OS=Aliivibrio salmonicida (strain LFI1238) GN=ndk PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.127e-20 Identity = 50/120 (41.67%), Postives = 75/120 (62.50%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 L+G I R EK G + K++++ + A+ Y + K FF +L+EY+TSGPV+ + EGE V+ R ++G TNP ++A G++R D AI N +HGSDS ESA +EIA +F + I Sbjct: 19 LIGAIYRRIEKTGMQVVAAKMLSLTKEQAQGFYAEHEGKEFFDALVEYMTSGPVMVQVLEGESVITRYRELMGKTNPDEAACGSLRSDYAISMRYNSVHGSDSPESAAREIAYFFVEDEI 138
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_ACIAC (Nucleoside diphosphate kinase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=ndk PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.127e-20 Identity = 45/116 (38.79%), Postives = 72/116 (62.07%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 367 ++G+I RFE G + ++ + R AE+ Y +PFF L++++ SGPV+ + EGE + R ++GAT+P ++APGTIR D A N +HGSD+ E+AQ E++ +FP Sbjct: 19 VIGQIYARFEAAGLKIAAARMAHLSRQEAEQFYAVHKERPFFKDLVDFMISGPVMIQVLEGENAILKNRELMGATDPKKAAPGTIRADFADSIDANAVHGSDAAETAQVEVSFFFP 134
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_PROA2 (Nucleoside diphosphate kinase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=ndk PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.472e-20 Identity = 52/115 (45.22%), Postives = 72/115 (62.61%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 L+G +I + E+ GF + +K + A + Y S +PF+G L+E+++SGP V MI E E V RT+IGAT+PA++A GTIR A G NIIHGSDS E+AQ E +F Sbjct: 17 LIGAVIDKIERAGFRVVAMKKTKLTAQTAGEFYAVHSQRPFYGELVEFMSSGPCVPMILEKENAVADFRTLIGATDPAEAAEGTIRNLFADSKGENIIHGSDSAENAQIEAGFFF 131
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_VARPS (Nucleoside diphosphate kinase OS=Variovorax paradoxus (strain S110) GN=ndk PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 46/115 (40.00%), Postives = 71/115 (61.74%), Query Frame = 2 Query: 20 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 ++G+I+ RFE G + KL+ + R AE+ Y +PFF L++++ SGPV + EGE + R ++GAT+P ++APGTIR D A N +HGSD+ E+A E+A +F Sbjct: 19 VIGKIVSRFEAAGLKIVAAKLVHLSRNEAEQFYSVHKERPFFKDLVDFMISGPVFVQVLEGENAIAKNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSDAPETAANEVAFFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_HALHL (Nucleoside diphosphate kinase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=ndk PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 46/114 (40.35%), Postives = 70/114 (61.40%), Query Frame = 2 Query: 23 VGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 364 +GEI+ RFE+ G + +++ + AE Y +PFF L+ ++TSGPV+ + EGE ++ R I+GATNP ++A GT+R D A N +HGSDS E+A+ EI +F Sbjct: 20 IGEILARFERSGLRVVAARMVRLSTEQAESFYAVHKERPFFNDLVGFMTSGPVMVQVLEGEDAIRKNREIMGATNPKEAAAGTLRHDFAESIDANAVHGSDSPETAENEIEFFF 133
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_FRATW (Nucleoside diphosphate kinase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=ndk PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 48/123 (39.02%), Postives = 73/123 (59.35%), Query Frame = 2 Query: 11 EGGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 E ++GEI RFEK G + K+ + + AE+ Y +PFF +L+E++ SGPV+ + EGE + R ++GATNP ++ GTIR D A N +HGSD+ ++A +EI +F D I Sbjct: 16 EKNVIGEIYSRFEKAGLRIIAAKMKHLSKAEAERFYAVHKDRPFFSALVEFMISGPVMIQVLEGENAIAKNRELMGATNPKEAKAGTIRADFADSIDANAVHGSDAEDTAAQEIRYFFSDTEI 138
BLAST of CX299949 vs. ExPASy Swiss-Prot
Match: NDK_FRATT (Nucleoside diphosphate kinase OS=Francisella tularensis subsp. tularensis GN=ndk PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 48/123 (39.02%), Postives = 73/123 (59.35%), Query Frame = 2 Query: 11 EGGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 379 E ++GEI RFEK G + K+ + + AE+ Y +PFF +L+E++ SGPV+ + EGE + R ++GATNP ++ GTIR D A N +HGSD+ ++A +EI +F D I Sbjct: 16 EKNVIGEIYSRFEKAGLRIIAAKMKHLSKAEAERFYAVHKDRPFFSALVEFMISGPVMIQVLEGENAIAKNRELMGATNPKEAKAGTIRADFADSIDANAVHGSDAEDTAAQEIRYFFSDTEI 138 The following BLAST results are available for this feature:
BLAST of CX299949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299949 ID=CX299949; Name=CX299949; organism=Citrus clementina; type=EST; length=686bpback to top |